RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 ZSCAN5BA6NJL1 495 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 USP27XA6NNY8 438 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 CHEK1O14757 476 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 CETN3O15182 167 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 N4BP1O75113 896 aaKnown RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 DNAJB6O75190 326 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 TRIM3O75382 744 aaPredicted RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 ZNF254O75437 659 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 STAMBPO95630 424 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 CXCL14O95715 111 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 GSTA1P08263 222 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 HIST1H2AGP0C0S8 130 aaPredicted RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 HSMCR30P0CW71 290 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 GCFC2P16383 781 aaKnown RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 TNNI1P19237 187 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 FUT1P19526 365 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 DRD5P21918 477 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 NMT1P30419 496 aaKnown RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 AXLP30530 894 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 CCR1P32246 355 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 NF2P35240 595 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 RFC4P35249 363 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 CARD18P57730 90 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 TIMM10P62072 90 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 DAZ2Q13117 558 aaKnown RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 EIF4EBP1Q13541 118 aaPredicted RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 DOC2AQ14183 400 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 GK2Q14410 553 aaPredicted RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 PDIA5Q14554 519 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 STK38Q15208 465 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 EXOC3L2Q2M3D2 409 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 XKR4Q5GH76 650 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 RABGAP1LQ5R372 815 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 C1orf185Q5T7R7 199 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 METTL11BQ5VVY1 283 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 NKAIN2Q5VXU1 208 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 CARD17Q5XLA6 110 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 TPGS2Q68CL5 300 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 HIST2H2AA3Q6FI13 130 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 TMEM225Q6GV28 225 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 ASPHD2Q6ICH7 369 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 METAP1DQ6UB28 335 aaPredicted RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 C1orf186Q6ZWK4 172 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 FRA10AC1Q70Z53 315 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 CENPUQ71F23 418 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 BNIPLQ7Z465 357 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 TGIF2LXQ8IUE1 241 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 GCNT2Q8N0V5 402 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 BCORP1Q8N888 145 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 ZNF321PQ8N8H1 164 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 STEAP2Q8NFT2 490 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 MARCH1Q8TCQ1 289 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 DLX4Q92988 240 aaPredicted RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 HIST1H2ACQ93077 130 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 MCUR1Q96AQ8 359 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 LRRC39Q96DD0 335 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 MRPL38Q96DV4 380 aaKnown RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 HPDLQ96IR7 371 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 PSKH2Q96QS6 385 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 ACCSQ96QU6 501 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 CITED1Q99966 193 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 EDEM2Q9BV94 578 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 METTL7AQ9H8H3 244 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 DAZ3Q9NR90 486 aaKnown RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 MRPL22Q9NWU5 206 aaKnown RBP2.06□□□□□ -2.08
LINC01088-210ENST00000513153 ELOVL2Q9NXB9 296 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 SUN2Q9UH99 717 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 CACNG2Q9Y698 323 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 MAD1L1Q9Y6D9 718 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 WSB1Q9Y6I7 421 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 SF3B1O75533 1304 aaKnown RBP eCLIP2.06□□□□□ -2.084e-7■■■■□ 23.4
LINC01088-210ENST00000513153 KDRP35968 1356 aa2.06□□□□□ -2.08
LINC01088-210ENST00000513153 SERTM2A0A1B0GWG4 89 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 SMCO3A2RU48 225 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 ARHGEF35A5YM69 484 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 SUPT3HB4E1H0 165 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 CHADO15335 359 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 NME2P1O60361 137 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 TOXO94900 526 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 MBD3O95983 291 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 TIMP1P01033 207 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 NPPAP01160 153 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 FGF4P08620 206 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 SERPINF2P08697 491 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 GSTT2P0CG29 244 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 GSTT2BP0CG30 244 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 PNMTP11086 282 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 SLC2A3P11169 496 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 SDC1P18827 310 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 DPP4P27487 766 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 HOXD10P28358 340 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 PRDX2P32119 198 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 TAGLN2P37802 199 aaKnown RBP2.05□□□□□ -2.08
LINC01088-210ENST00000513153 PMELP40967 661 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 CD151P48509 253 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 RAG2P55895 527 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 RPL23AP62750 156 aaKnown RBP2.05□□□□□ -2.08
LINC01088-210ENST00000513153 TPM4P67936 248 aa2.05□□□□□ -2.08
LINC01088-210ENST00000513153 TGM3Q08188 693 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms