RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 VCPKMTQ9H867 229 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 ZDHHC4Q9NPG8 344 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 TRIM10Q9UDY6 481 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 NUFIP1Q9UHK0 495 aaKnown RBP0.99□□□□□ -2.25
PDGFC-208ENST00000512711 ASF1AQ9Y294 204 aa0.99□□□□□ -2.25
PDGFC-208ENST00000512711 FCGBPQ9Y6R7 5405 aaPredicted RBP0.99□□□□□ -2.25
PDGFC-208ENST00000512711 PDS5BQ9NTI5 1447 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 FBN3Q75N90 2809 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 CCDC7Q96M83 1385 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 A0A0G2JN53 185 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 IQANK1A0A1B0GTG1 560 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 A6NIZ1 184 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 LRRC30A6NM36 301 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 IDSB3KWA1 339 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 DUX1O43812 170 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 ANGPTL7O43827 346 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 LALBAP00709 142 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 IGKV1D-16P01601 117 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 P04436 131 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 RBMY1CP0DJD4 496 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 PDHBP11177 359 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 ICAM2P13598 275 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 MUC1P15941 1255 aaPredicted RBP0.98□□□□□ -2.25
PDGFC-208ENST00000512711 ATP5DP30049 168 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 BTCP35070 178 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 KLK7P49862 253 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 TAS2R19P59542 299 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 RAP1BP61224 184 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 NTHL1P78549 312 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 BDH1Q02338 343 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 MORF4L2Q15014 288 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 STK11Q15831 433 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 KLF17Q5JT82 389 aaPredicted RBP0.98□□□□□ -2.25
PDGFC-208ENST00000512711 EFCAB13Q8IY85 973 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 SVOPLQ8N434 492 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 C10orf53Q8N6V4 93 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 ANKRD20A12PQ8NF67 263 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 OR56B4Q8NH76 319 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 KRT35Q92764 455 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 NCLNQ969V3 563 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 FEM1AQ9BSK4 669 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 WRAP53Q9BUR4 548 aaKnown RBP0.98□□□□□ -2.25
PDGFC-208ENST00000512711 ZNF430Q9H8G1 570 aaPredicted RBP0.98□□□□□ -2.25
PDGFC-208ENST00000512711 PRMT8Q9NR22 394 aaPredicted RBP0.98□□□□□ -2.25
PDGFC-208ENST00000512711 HMG20BQ9P0W2 317 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 ZNF629Q9UEG4 869 aaPredicted RBP0.98□□□□□ -2.25
PDGFC-208ENST00000512711 WARS2Q9UGM6 360 aaKnown RBP0.98□□□□□ -2.25
PDGFC-208ENST00000512711 CYTH4Q9UIA0 394 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 ZNF229Q9UJW7 825 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 APPL1Q9UKG1 709 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 STRAPQ9Y3F4 350 aaKnown RBP0.98□□□□□ -2.25
PDGFC-208ENST00000512711 PLA2R1Q13018 1463 aa0.98□□□□□ -2.25
PDGFC-208ENST00000512711 RPGRIP1LQ68CZ1 1315 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 IGHV3OR16-13A0A075B7E8 117 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 HELTA6NFD8 242 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 VSTM2BA6NLU5 285 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 ANKRD30BLA7E2S9 258 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 E9PBE3 544 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 HCRTR1O43613 425 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 TPST2O60704 377 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 ENTPD5O75356 428 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 GNA14O95837 355 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 F10P00742 488 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 CXCL10P02778 98 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 HSP90AA1P07900 732 aaKnown RBP0.97□□□□□ -2.25
PDGFC-208ENST00000512711 TLX1NBP0CAT3 122 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 TSPY4P0CV99 314 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 TSPY10P0CW01 314 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 UQCRBP14927 111 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 ATP6V1B2P21281 511 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 NMT1P30419 496 aaKnown RBP0.97□□□□□ -2.25
PDGFC-208ENST00000512711 MAGEA5P43359 124 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 NUMBP49757 651 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 CACNG7P62955 275 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 CHRNB3Q05901 458 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 REG3AQ06141 175 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 NSUN5P1Q3KNT7 163 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 ADPRMQ3LIE5 342 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 C1orf100Q5SVJ3 147 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 ATL3Q6DD88 541 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 OR6B2Q6IFH4 312 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 FRMPD2BQ6IN97 320 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 VPS36Q86VN1 386 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 LRP11Q86VZ4 500 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 PCP2Q8IVA1 136 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 URGCPQ8TCY9 931 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 BRSK1Q8TDC3 778 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 SDSLQ96GA7 329 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 TESK2Q96S53 571 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 NPAS2Q99743 824 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 GPR61Q9BZJ8 451 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 ULBP2Q9BZM5 246 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 LPAR2Q9HBW0 351 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 SIRT7Q9NRC8 400 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 SMPD3Q9NY59 655 aaPredicted RBP0.97□□□□□ -2.25
PDGFC-208ENST00000512711 KCNN3Q9UGI6 736 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 ANAPC7Q9UJX3 599 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 MAD1L1Q9Y6D9 718 aa0.97□□□□□ -2.25
PDGFC-208ENST00000512711 PHF3Q92576 2039 aaKnown RBP0.97□□□□□ -2.25
PDGFC-208ENST00000512711 TRBV2A0A0J9YWF9 115 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms