RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 UBE2IP63279 158 aaKnown RBP8.37□□□□□ -1.07
VCAN-208ENST00000512590 FAM122CQ6P4D5 195 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 FAM199XQ6PEV8 388 aaPredicted RBP8.37□□□□□ -1.07
VCAN-208ENST00000512590 NPEPL1Q8NDH3 523 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 OR4K13Q8NH42 304 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 SLC25A31Q9H0C2 315 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 NIPAL2Q9H841 368 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 ERVMER34-1Q9H9K5 563 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 L2HGDHQ9H9P8 463 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 CRLF2Q9HC73 371 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 SLC6A20Q9NP91 592 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 PIGVQ9NUD9 493 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 ASIC5Q9NY37 505 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 STUB1Q9UNE7 303 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 STMND1H3BQB6 276 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 MASP2O00187 686 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 OR7A17O14581 309 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 ARPC3O15145 178 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 KCNK2O95069 426 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 METTL15P1P0C7V9 234 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 HADHBP55084 474 aaKnown RBP8.37□□□□□ -1.07
VCAN-208ENST00000512590 SNTB1Q13884 538 aaKnown RBP8.37□□□□□ -1.07
VCAN-208ENST00000512590 OPCMLQ14982 345 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 ADAMTS19Q8TE59 1207 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 HEYLQ9NQ87 328 aaPredicted RBP8.37□□□□□ -1.07
VCAN-208ENST00000512590 MTCH1Q9NZJ7 389 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 DNAJB9Q9UBS3 223 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 CD36P16671 472 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 BDKRB2P30411 391 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 OR1E2P47887 323 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 PAFAH1B2P68402 229 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 RTP5Q14D33 572 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 TSTQ16762 297 aaKnown RBP8.37□□□□□ -1.07
VCAN-208ENST00000512590 TSGA10IPQ3SY00 556 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 C10orf62Q5T681 223 aaPredicted RBP8.37□□□□□ -1.07
VCAN-208ENST00000512590 TRNP1Q6NT89 227 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 ZNF836Q6ZNA1 936 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 CARM1Q86X55 608 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 GABRG1Q8N1C3 465 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 CPXM2Q8N436 756 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 LILRB1Q8NHL6 650 aaPredicted RBP8.37□□□□□ -1.07
VCAN-208ENST00000512590 CCDC74AQ96AQ1 378 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 KIRREL1Q96J84 757 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 MECRQ9BV79 373 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 SARGQ9BW04 601 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 SGPP1Q9BX95 441 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 ASTN1O14525 1302 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 CASZ1Q86V15 1759 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 XPNPEP2O43895 674 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 RAD1O60671 282 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 SNNO75324 88 aaPredicted RBP8.37□□□□□ -1.07
VCAN-208ENST00000512590 CD34P28906 385 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 HSF5Q4G112 596 aaPredicted RBP8.37□□□□□ -1.07
VCAN-208ENST00000512590 VASH2Q86V25 355 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 OR5D14Q8NGL3 314 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 C1orf74Q96LT6 269 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 ADOQ96SZ5 270 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 BEX2Q9BXY8 128 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 BEX1Q9HBH7 125 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 NLKQ9UBE8 527 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 USP22Q9UPT9 525 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 SLC35A3Q9Y2D2 325 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 KIF1BO60333 1816 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 PREX2Q70Z35 1606 aa8.37□□□□□ -1.07
VCAN-208ENST00000512590 SOBPA7XYQ1 873 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 GOSR2O14653 212 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 UCHL1P09936 223 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 ARAFP10398 606 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 VN1R2Q8NFZ6 395 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 HUS1BQ8NHY5 278 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 ROPN1LQ96C74 230 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 ZNF436Q9C0F3 470 aaPredicted RBP8.36□□□□□ -1.07
VCAN-208ENST00000512590 SMOC2Q9H3U7 446 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 RNF11Q9Y3C5 154 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 PUS1Q9Y606 427 aaKnown RBP eCLIP8.36□□□□□ -1.07
VCAN-208ENST00000512590 TCRBV9S1A1TA0A576 114 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 GALR2O43603 387 aaPredicted RBP8.36□□□□□ -1.07
VCAN-208ENST00000512590 RP2O75695 350 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 POU3F3P20264 500 aaPredicted RBP8.36□□□□□ -1.07
VCAN-208ENST00000512590 PBX2P40425 430 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 NAAAQ02083 359 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 SLC14A1Q13336 389 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 ZNF273Q14593 569 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 NFATC4Q14934 902 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 DLK2Q6UY11 383 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 RETREG3Q86VR2 466 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 FAM71AQ8IYT1 594 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 CLDN19Q8N6F1 224 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 OR5D16Q8NGK9 328 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 FCRL5Q96RD9 977 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 CACNG6Q9BXT2 260 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 PRDM14Q9GZV8 571 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 SLC6A17Q9H1V8 727 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 SPACA1Q9HBV2 294 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 RNF24Q9Y225 148 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 CYTIPO60759 359 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 TAS2R38P59533 333 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 ARHGAP1Q07960 439 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 IRF4Q15306 451 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 ZNF628Q5EBL2 1059 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms