RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 PROX1Q92786 737 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 CPNE4Q96A23 557 aaPredicted RBP6.75□□□□□ -1.33
NR1I3-231ENST00000512340 DDIT4LQ96D03 193 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 RCN3Q96D15 328 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 KLHL15Q96M94 604 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 RNF145Q96MT1 663 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 DMRTA2Q96SC8 542 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 CCT8L2Q96SF2 557 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 OSBPL10Q9BXB5 764 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 PIGMQ9H3S5 423 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 NANOGQ9H9S0 305 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 TMEM27Q9HBJ8 222 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 SLC52A3Q9NQ40 469 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 SLC6A13Q9NSD5 602 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 ACER3Q9NUN7 267 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 SLC25A37Q9NYZ2 338 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 ARMCX1Q9P291 453 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 SPRR3Q9UBC9 169 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 FOXD3Q9UJU5 478 aaPredicted RBP6.75□□□□□ -1.33
NR1I3-231ENST00000512340 ADAM21Q9UKJ8 722 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 BAG5Q9UL15 447 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 PAIP2BQ9ULR5 123 aaKnown RBP6.75□□□□□ -1.33
NR1I3-231ENST00000512340 ZNF443Q9Y2A4 671 aaPredicted RBP6.75□□□□□ -1.33
NR1I3-231ENST00000512340 SLC9A8Q9Y2E8 581 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 EMC9Q9Y3B6 208 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 ZNF337Q9Y3M9 751 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 NBPF19A0A087WUL8 3843 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 TRBV5-3A0A0A0MS03 114 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 CDHR4A6H8M9 788 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 WIPF3A6NGB9 483 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 CLCA1A8K7I4 914 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 AP3D1O14617 1153 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 DNPH1O43598 174 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 IL18BPO95998 194 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 C8BP07358 591 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 TMIGD3P0DMS9 266 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 GLI4P10075 376 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 PNMTP11086 282 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 PRKCAP17252 672 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 RPS4Y1P22090 263 aaKnown RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 CTSSP25774 331 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 GTF2E2P29084 291 aaKnown RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 PCGF2P35227 344 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 SLC1A3P43003 542 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 IDH2P48735 452 aaKnown RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 STARP49675 285 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 LHX2P50458 406 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 NUDT2P50583 147 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 MVDP53602 400 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 CLDN15P56746 228 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 NUP107P57740 925 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 RGS8P57771 180 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 MTPNP58546 118 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 TUBA1BP68363 451 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 FOXF1Q12946 379 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 VEZF1Q14119 521 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 RNPS1Q15287 305 aaKnown RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 VMACQ2NL98 169 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 TMEM176BQ3YBM2 270 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 SLC25A53Q5H9E4 307 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 WBP2NLQ6ICG8 309 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 DHRS4L2Q6PKH6 230 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 C5orf46Q6UWT4 87 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 C16orf89Q6UX73 402 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 TUBA1AQ71U36 451 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 FGD2Q7Z6J4 655 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 PIGWQ7Z7B1 504 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 STK32CQ86UX6 486 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 KIF18BQ86Y91 864 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 CHERPQ8IWX8 916 aaKnown RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 SLC43A2Q8N370 569 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 OR2T12Q8NG77 320 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 OR2V1Q8NHB1 315 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 LILRB4Q8NHJ6 448 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 DNAJA4Q8WW22 397 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 OSTF1Q92882 214 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 POP5Q969H6 163 aaKnown RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 MAL2Q969L2 176 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 UCN2Q96RP3 112 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 TUBA1CQ9BQE3 449 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 ZNF559Q9BR84 538 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 CCDC106Q9BWC9 280 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 SFXN3Q9BWM7 321 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 TAPBPLQ9BX59 468 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 PINK1Q9BXM7 581 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 TRIM2Q9C040 744 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 KAT8Q9H7Z6 458 aaKnown RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 SPAG4Q9NPE6 437 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 ADPRHL2Q9NX46 363 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 SLAMF8Q9P0V8 285 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 ZNF629Q9UEG4 869 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 PLEKHB1Q9UF11 243 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 TESQ9UGI8 421 aaKnown RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 CHRNA9Q9UGM1 479 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 TAGLN3Q9UI15 199 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 HDGFL3Q9Y3E1 203 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 ABCA12Q86UK0 2595 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 PHF3Q92576 2039 aaKnown RBP6.74□□□□□ -1.33
NR1I3-231ENST00000512340 DSPPQ9NZW4 1301 aa6.74□□□□□ -1.33
NR1I3-231ENST00000512340 ELOVL7A1L3X0 281 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms