RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 C20orf27Q9GZN8 174 aa11.21□□□□□ -0.61
KDM3B-206ENST00000509468 QRSL1Q9H0R6 528 aaKnown RBP11.21□□□□□ -0.61
KDM3B-206ENST00000509468 CENPHQ9H3R5 247 aa11.21□□□□□ -0.61
KDM3B-206ENST00000509468 EMC3Q9P0I2 261 aa11.21□□□□□ -0.61
KDM3B-206ENST00000509468 HAO1Q9UJM8 370 aa11.21□□□□□ -0.61
KDM3B-206ENST00000509468 PRDM4Q9UKN5 801 aa11.21□□□□□ -0.61
KDM3B-206ENST00000509468 LAMP3Q9UQV4 416 aa11.21□□□□□ -0.61
KDM3B-206ENST00000509468 LIPT1Q9Y234 373 aa11.21□□□□□ -0.61
KDM3B-206ENST00000509468 FREM1Q5H8C1 2179 aa11.21□□□□□ -0.62
KDM3B-206ENST00000509468 C9JVG2 144 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 SMAD9O15198 467 aaKnown RBP11.2□□□□□ -0.62
KDM3B-206ENST00000509468 KIAA0513O60268 411 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 TFPIP10646 304 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 HTR3AP46098 478 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 KHKP50053 298 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 CASP9P55211 416 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 RPS4XP62701 263 aaKnown RBP11.2□□□□□ -0.62
KDM3B-206ENST00000509468 PHC1P78364 1004 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 KCNJ10P78508 379 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 TSC22D1Q15714 1073 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 ETFDHQ16134 617 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 MAPK14Q16539 360 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 GPAT3Q53EU6 434 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 OGFOD2Q6N063 350 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 TNFAIP8L2Q6P589 184 aaPredicted RBP11.2□□□□□ -0.62
KDM3B-206ENST00000509468 SPATA19Q7Z5L4 167 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 RAB3IL1Q8TBN0 382 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 PMM1Q92871 262 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 RAB8BQ92930 207 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 FBXW5Q969U6 566 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 ZNF775Q96BV0 537 aaPredicted RBP11.2□□□□□ -0.62
KDM3B-206ENST00000509468 SORT1Q99523 831 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 PARD6BQ9BYG5 372 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 NUF2Q9BZD4 464 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 MTHFD2LQ9H903 347 aaPredicted RBP11.2□□□□□ -0.62
KDM3B-206ENST00000509468 MEAF6Q9HAF1 191 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 MARCOQ9UEW3 520 aaPredicted RBP11.2□□□□□ -0.62
KDM3B-206ENST00000509468 BTNL2Q9UIR0 455 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 ING1Q9UK53 422 aaPredicted RBP11.2□□□□□ -0.62
KDM3B-206ENST00000509468 HDGFL3Q9Y3E1 203 aa11.2□□□□□ -0.62
KDM3B-206ENST00000509468 TRIM64A6NGJ6 449 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 TRIM64BA6NI03 449 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 E9PBE3 544 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 GPR171O14626 319 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 CLOCKO15516 846 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 DNPH1O43598 174 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 H6PDO95479 791 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 BGNP21810 368 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 RYKP34925 604 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 IDUAP35475 653 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 MAP2K6P52564 334 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 HPCAP84074 193 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 GNA13Q14344 377 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 PPA1Q15181 289 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 FAM174BQ3ZCQ3 159 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 SYT14P1Q58G82 188 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 SPANXN4Q5MJ08 99 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 TIMM23BQ5SRD1 257 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 HHATQ5VTY9 493 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 GRINAQ7Z429 371 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 CMIPQ8IY22 773 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 ARFGAP2Q8N6H7 521 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 FAM71CQ8NEG0 241 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 LILRB1Q8NHL6 650 aaPredicted RBP11.19□□□□□ -0.62
KDM3B-206ENST00000509468 SMAP2Q8WU79 429 aaPredicted RBP11.19□□□□□ -0.62
KDM3B-206ENST00000509468 ZNF75CPQ92670 426 aaPredicted RBP11.19□□□□□ -0.62
KDM3B-206ENST00000509468 ZG16BQ96DA0 208 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 RADILQ96JH8 1075 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 CCDC115Q96NT0 180 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 TRNT1Q96Q11 434 aaKnown RBP11.19□□□□□ -0.62
KDM3B-206ENST00000509468 PANX1Q96RD7 426 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 PAIP2Q9BPZ3 127 aaKnown RBP11.19□□□□□ -0.62
KDM3B-206ENST00000509468 SLC35A5Q9BS91 424 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 CCDC106Q9BWC9 280 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 EXOSC3Q9NQT5 275 aaKnown RBP11.19□□□□□ -0.62
KDM3B-206ENST00000509468 PNPOQ9NVS9 261 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 CHRNA9Q9UGM1 479 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 PRSS50Q9UI38 385 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 TRAPPC4Q9Y296 219 aa11.19□□□□□ -0.62
KDM3B-206ENST00000509468 NAV3Q8IVL0 2385 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 IGKV3D-15A0A087WSY6 115 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 CENPVL1A0A0U1RR11 272 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 DPRXA6NFQ7 191 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 CCDC154A6NI56 674 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 TRPC5OSA6NMA1 111 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 OVOL3O00110 214 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 LYZL6O75951 148 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 PGM3O95394 542 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 PMS2P2O95744 297 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 UQCRBP14927 111 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 GGT1P19440 569 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 MAGEA8P43361 318 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 CHRNEQ04844 493 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 BSPH1Q075Z2 132 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 MPP2Q14168 576 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 ZNF672Q499Z4 452 aaPredicted RBP11.18□□□□□ -0.62
KDM3B-206ENST00000509468 TNFAIP8L3Q5GJ75 292 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 CEP85LQ5SZL2 805 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 FBXW9Q5XUX1 488 aa11.18□□□□□ -0.62
KDM3B-206ENST00000509468 FRRS1Q6ZNA5 592 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms