RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TOP1MTQ969P6 601 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 MMS19Q96T76 1030 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ACOX2Q99424 681 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 OMDQ99983 421 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 DUSP23Q9BVJ7 150 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 RIOK2Q9BVS4 552 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 UGT1A10Q9HAW8 530 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CACYBPQ9HB71 228 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 APMAPQ9HDC9 416 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 FRRS1LQ9P0K9 344 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ING1Q9UK53 422 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SH2B3Q9UQQ2 575 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 MYOCOSA0A1B0GUC4 107 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 hDV102S1A0JD36 115 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 HSPB2A8KAH6 182 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CXorf49A8MYA2 514 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 MS4A18H0YCH9 400 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 H3BN98 237 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 FAM229AH3BQW9 127 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SDC3O75056 442 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 RPLP0P05388 317 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 PNMA6AP0CW24 399 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 HTR2AP28223 471 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 EMP1P54849 157 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TAS2R39P59534 338 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 KCNJ2P63252 427 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CDK3Q00526 305 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 INCA1Q0VD86 236 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 NR1D2Q14995 579 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 HSPB2Q16082 182 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ATP6V1FQ16864 119 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 PDLIM3Q53GG5 364 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 DUPD1Q68J44 220 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SLC27A1Q6PCB7 646 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 Q6ZRG5 221 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 MEPCEQ7L2J0 689 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SLC22A16Q86VW1 577 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SYT12Q8IV01 421 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF439Q8NDP4 499 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 OR52I1Q8NGK6 324 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TMEM239Q8WW34 195 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 NTAN1Q96AB6 310 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 NEU1Q99519 415 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 C19orf43Q9BQ61 176 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 WDR77Q9BQA1 342 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 PIGQQ9BRB3 760 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CCM2Q9BSQ5 444 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SLA2Q9H6Q3 261 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 UCK1Q9HA47 277 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 IL23AQ9NPF7 189 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 POU2F3Q9UKI9 436 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 RALYQ9UKM9 306 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 PTPRDP23468 1912 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TMEM89A2RUT3 159 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 OR14I1A6ND48 311 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 MSTNO14793 375 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 PLPP2O43688 288 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 UGT1A9O60656 530 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 PRKRAO75569 313 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ADAP1O75689 374 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 DCTN3O75935 186 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CRYABP02511 175 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 KCNE1P15382 129 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 POLR2CP19387 275 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 UCP1P25874 307 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CD82P27701 267 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 RPL34P49207 117 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 BLKP51451 505 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CLDN8P56748 225 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 FLI1Q01543 452 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CSTF1Q05048 431 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SLC18A2Q05940 514 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ARFRP1Q13795 201 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF234Q14588 700 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SOWAHAQ2M3V2 549 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 OR4A47Q6IF82 309 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CDPF1Q6NVV7 123 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF562Q6V9R5 426 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 MBOAT1Q6ZNC8 495 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 RALGPS2Q86X27 583 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ZFAND4Q86XD8 727 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 STX19Q8N4C7 294 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TMEM35BQ8NCS4 154 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 BHLHE22Q8NFJ8 381 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 OR7G1Q8NGA0 311 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 OR51G2Q8NGK0 314 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 DAZLQ92904 295 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 RAB8BQ92930 207 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CD101Q93033 1021 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 DCUN1D1Q96GG9 259 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 HRASLS5Q96KN8 279 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 NECTIN4Q96NY8 510 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 LMF2Q9BU23 707 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 DUSP16Q9BY84 665 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 B3GNT4Q9C0J1 378 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 OR51B6Q9H340 312 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CYSLTR2Q9NS75 346 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ZDHHC7Q9NXF8 308 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 GLTPQ9NZD2 209 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 GAB2Q9UQC2 676 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms