RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 GSAPA4D1B5 854 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 EPOPA6NHQ4 379 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 DISC1C4P0D8 188 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 K7ERI5 159 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CXCR6O00574 342 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ACKR2O00590 384 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SCAMP1O15126 338 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SSNA1O43805 119 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 EDIL3O43854 480 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CDC123O75794 336 aaPredicted RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ATG12O94817 140 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 APBB3O95704 486 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 PGK1P00558 417 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 EPOP01588 193 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ADRB2P07550 413 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 NMBP08949 121 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SPARCP09486 303 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CLTBP09497 229 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SLC35E2BP0CK96 405 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SULT1A3P0DMM9 295 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SULT1A4P0DMN0 295 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ERVK-10P10266 1014 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SELLP14151 372 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 POU2F1P14859 743 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CPN1P15169 458 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CSF2RAP15509 400 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF8P17098 575 aaPredicted RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ACADLP28330 430 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 RBMS1P29558 406 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 AGTR1P30556 359 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 HOXC8P31273 242 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 S100A11P31949 105 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CTNNB1P35222 781 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ATP5C1P36542 298 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CSKP41240 450 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 GYG1P46976 350 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 PCP4P48539 62 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ARFIP1P53367 373 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 NUDT6P53370 316 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SUCLG1P53597 346 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 MAZP56270 477 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 HSD17B7P56937 341 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 DSCR9P59020 149 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 BPIFB3P59826 476 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 FKBP1AP62942 108 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 DEFA5Q01523 94 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SLC3A1Q07837 685 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ECH1Q13011 328 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 LCP2Q13094 533 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 MXD4Q14582 209 aaPredicted RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 HMGN3Q15651 99 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 GPR68Q15743 365 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 DPYSL2Q16555 572 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF528Q3MIS6 628 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 XKR3Q5GH77 459 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 TECRLQ5HYJ1 363 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SAPCD1Q5SSQ6 148 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 THEM4Q5T1C6 240 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 HECTD3Q5T447 861 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 FAM69AQ5T7M9 428 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 MFSD14CQ5VZR4 134 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF57Q68EA5 555 aaPredicted RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 DHRS7BQ6IAN0 325 aaPredicted RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 LAIR2Q6ISS4 152 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 FAHD1Q6P587 224 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 NOTUMQ6P988 496 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 PAMR1Q6UXH9 720 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 WASH2PQ6VEQ5 465 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 C17orf107Q6ZR85 190 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 Q6ZTK2 550 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 MSANTD1Q6ZTZ1 278 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CHMP1BQ7LBR1 199 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 MRPL52Q86TS9 123 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 TAC4Q86UU9 113 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ZFAND4Q86XD8 727 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CBWD2Q8IUF1 395 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CCDC71Q8IV32 467 aaPredicted RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CFAP206Q8IYR0 622 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SLC22A15Q8IZD6 547 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 FTMTQ8N4E7 242 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF561Q8N587 486 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SPICQ8N5J4 248 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 EID2Q8N6I1 236 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 C15orf54Q8N8G6 183 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 PRR26Q8N8Z3 221 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 COLGALT1Q8NBJ5 622 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 PPHLN1Q8NEY8 458 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 PROKR2Q8NFJ6 384 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 OR56A4Q8NGH8 313 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 OR5J2Q8NH18 312 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 RHEBL1Q8TAI7 183 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CEP76Q8TAP6 659 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 HMGCLL1Q8TB92 370 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 NANPQ8TBE9 248 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CHURC1Q8WUH1 139 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 TWIST2Q8WVJ9 160 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SLC5A11Q8WWX8 675 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ISG20Q96AZ6 181 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ULK4Q96C45 1275 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SENP8Q96LD8 212 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms