RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 PRPF19Q9UMS4 504 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ERVK-19Q9WJR5 959 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PRELID1Q9Y255 219 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TIMM22Q9Y584 194 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 U3KQV3 271 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 BDP1A6H8Y1 2624 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TEX13DA0A0J9YY54 714 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 DAPL1A0PJW8 107 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 HMX3A6NHT5 357 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 CRYM-AS1A6NIL9 109 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SULT2B1O00204 365 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TNFRSF11BO00300 401 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 HDAC3O15379 428 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 HTRA2O43464 458 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MRPL33O75394 65 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 LCATP04180 440 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 CHRM4P08173 479 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 C1GALT1C1LP0DN25 315 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PEPDP12955 493 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 GALP22466 123 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PSMA1P25786 263 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 GSTM2P28161 218 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MAGEA2P43356 314 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MFSD13AQ14CX5 517 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 BCL7AQ4VC05 210 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PRAMEF8Q5VWM4 474 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PRAMEF7Q5VXH5 474 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ATG9BQ674R7 924 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SP5Q6BEB4 398 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 BRICD5Q6PL45 260 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF627Q7L945 461 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ABI3BPQ7Z7G0 1075 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ANKRD46Q86W74 232 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF595Q8IYB9 648 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 KLHDC8AQ8IYD2 350 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 CLDN19Q8N6F1 224 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OR1L3Q8NH93 324 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PIWIL2Q8TC59 973 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 NUDT8Q8WV74 236 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 H1FXQ92522 213 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PIK3IP1Q96FE7 263 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TXNDC15Q96J42 360 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FAM173AQ9BQD7 235 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 DUSP26Q9BV47 211 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 LRRC3Q9BY71 257 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SPAG4Q9NPE6 437 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 RPL36Q9Y3U8 105 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 COL4A3Q01955 1670 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 CKAP5Q14008 2032 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 NAV3Q8IVL0 2385 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 IGHV5-51A0A0C4DH38 117 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PMS2P1A4D2B8 440 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 NUDT19A8MXV4 375 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TIMM8AO60220 97 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FKBP6O75344 327 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ITGA10O75578 1167 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FGF3P11487 239 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 EFNA1P20827 205 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 NR4A1P22736 598 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ETV5P41161 510 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PIK3CBP42338 1070 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TPTEP56180 551 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 C21orf58P58505 322 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 RAB31Q13636 194 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MAPK11Q15759 364 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 NEDD8Q15843 81 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 WIPI1Q5MNZ9 446 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SLX4IPQ5VYV7 408 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FRG2Q64ET8 278 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FAM122CQ6P4D5 195 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ANKRD37Q7Z713 158 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 NPWQ8N729 165 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 EIF1ADQ8N9N8 165 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OR52R1Q8NGF1 315 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OR52J3Q8NH60 311 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 HOXB13Q92826 284 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 RTP4Q96DX8 246 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FRG2BQ96QU4 278 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TRIB3Q96RU7 358 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PHB2Q99623 299 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OSBPL11Q9BXB4 747 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 DGCR6LQ9BY27 220 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 LACRTQ9GZZ8 138 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 C14orf119Q9NWQ9 140 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 VNN3Q9NY84 501 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MRPL15Q9P015 296 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MGAT4CQ9UBM8 478 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 C14orf166Q9Y224 244 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 RAP2CQ9Y3L5 183 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PRSS21Q9Y6M0 314 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PTPRDP23468 1912 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TRBC2A0A5B9 178 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF670-ZNF695F2Z2N8 137 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 FAM189A1O60320 539 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SNAPC5O75971 98 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 DIRAS3O95661 229 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CEACAM5P06731 702 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZDHHC11BP0C7U3 371 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PRPS1L1P21108 318 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PRKCIP41743 596 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms