RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 PRRG3Q9BZD7 231 aa6.55□□□□□ -1.36
CLCN3-206ENST00000507875 ACTL8Q9H568 366 aa6.55□□□□□ -1.36
CLCN3-206ENST00000507875 NANOGQ9H9S0 305 aa6.55□□□□□ -1.36
CLCN3-206ENST00000507875 PLAGL1Q9UM63 463 aa6.55□□□□□ -1.36
CLCN3-206ENST00000507875 OSGIN2Q9Y236 505 aa6.55□□□□□ -1.36
CLCN3-206ENST00000507875 SLC5A6Q9Y289 635 aa6.55□□□□□ -1.36
CLCN3-206ENST00000507875 EP300Q09472 2414 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-206ENST00000507875 GVINP1Q7Z2Y8 2422 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 OTOGLQ3ZCN5 2332 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 LOC102723996A0A087X1L8 192 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 DHRS12A0PJE2 317 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 B5MCH6 92 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 H7C1Q1 480 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 TOX3O15405 576 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 EML2O95834 649 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 FUT1P19526 365 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 TIA1P31483 386 aaKnown RBP eCLIP6.54□□□□□ -1.363e-6■■■□□ 17.1
CLCN3-206ENST00000507875 GSK3BP49841 420 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 CAMPP49913 170 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 EEFSECP57772 596 aaKnown RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 STXBP1P61764 594 aaKnown RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 LARS2Q15031 903 aaKnown RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 ADPRMQ3LIE5 342 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 MTX3Q5HYI7 312 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 CXorf66Q5JRM2 361 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 PRR31Q5SQ13 230 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 HMBOX1Q6NT76 420 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 NOXRED1Q6NXP6 359 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 METAP1DQ6UB28 335 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 SPESP1Q6UW49 350 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 AMIGO2Q86SJ2 522 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 KMT5CQ86Y97 462 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 IZUMO1Q8IYV9 350 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 MMP21Q8N119 569 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 SETD9Q8NE22 299 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 OR4E2Q8NGC2 313 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 CORO2AQ92828 525 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 ZNF597Q96LX8 424 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 OR2A14Q96R47 310 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 KCTD14Q9BQ13 255 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 NLNQ9BYT8 704 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 DPY30Q9C005 99 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 TCEAL2Q9H3H9 227 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 PARD6AQ9NPB6 346 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 CYB5R1Q9UHQ9 305 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 ZNF229Q9UJW7 825 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 POMT2Q9UKY4 750 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 PPIEQ9UNP9 301 aaKnown RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 POLR3HQ9Y535 204 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 ZNF292O60281 2723 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 A0A1B0GVT2 93 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 BTN3A3O00478 584 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 SLC30A4O14863 429 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 ARPC2O15144 300 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 HCRTR2O43614 444 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 NKX2-2O95096 273 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 GPIP06744 558 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 MMP9P14780 707 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 UGT2B7P16662 529 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 ZNF10P21506 573 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 PEBP1P30086 187 aaKnown RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 HPCAL1P37235 193 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 GDNFP39905 211 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 CSNK1EP49674 416 aaKnown RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 DUSP3P51452 185 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 RPS13P62277 151 aaKnown RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 RPL38P63173 70 aaKnown RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 RAE1P78406 368 aaKnown RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 RGS1Q08116 209 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 CBFBQ13951 182 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 NRF1Q16656 503 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 ZNF311Q5JNZ3 666 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 C6orf52Q5T4I8 152 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 KHDRBS2Q5VWX1 349 aaKnown RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 ETFRF1Q6IPR1 90 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 KRT80Q6KB66 452 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 DLEU7Q6UYE1 221 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 RRM2BQ7LG56 351 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 SPRED1Q7Z699 444 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 IFNEQ86WN2 208 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 DEFB119Q8N690 84 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 CAMKVQ8NCB2 501 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 C11orf65Q8NCR3 313 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 ADAMTS16Q8TE57 1224 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 TM4SF19Q96DZ7 209 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 CNBD2Q96M20 576 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 CLMPQ9H6B4 373 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 MYNNQ9NPC7 610 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 SIRT3Q9NTG7 399 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 SEMA5BQ9P283 1151 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 NLKQ9UBE8 527 aa6.54□□□□□ -1.36
CLCN3-206ENST00000507875 MDC1Q14676 2089 aaKnown RBP6.54□□□□□ -1.36
CLCN3-206ENST00000507875 WDR87Q6ZQQ6 2873 aa6.53□□□□□ -1.36
CLCN3-206ENST00000507875 MAGEB17A8MXT2 336 aa6.53□□□□□ -1.36
CLCN3-206ENST00000507875 AKAP8O43823 692 aaKnown RBP6.53□□□□□ -1.36
CLCN3-206ENST00000507875 SCELO95171 688 aa6.53□□□□□ -1.36
CLCN3-206ENST00000507875 PROS1P07225 676 aa6.53□□□□□ -1.36
CLCN3-206ENST00000507875 BCKDHAP12694 445 aa6.53□□□□□ -1.36
CLCN3-206ENST00000507875 HTR1EP28566 365 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms