RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 DNAJA3Q96EY1 480 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 ZIM3Q96PE6 472 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 DPY30Q9C005 99 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 TRIM2Q9C040 744 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 AKTIPQ9H8T0 292 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 ACER3Q9NUN7 267 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 EXD2Q9NVH0 621 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 PCDHGB4Q9UN71 923 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 LIPT1Q9Y234 373 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 WDR45Q9Y484 360 aa10.21□□□□□ -0.77
HMGCS1-204ENST00000507293 SULT2B1O00204 365 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 RAMP1O60894 148 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 SCN2BO60939 215 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 AGR2O95994 175 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 IGHV3-9P01782 118 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 SERPINE1P05121 402 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 OR12D1P0DN82 309 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 TFPIP10646 304 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 IDUAP35475 653 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 ABCE1P61221 599 aaKnown RBP10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 CSNK2A1P68400 391 aaPredicted RBP10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 DMTNQ08495 405 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 CHI3L2Q15782 390 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 ETFDHQ16134 617 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 PGGHGQ32M88 737 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 ATAD3BQ5T9A4 648 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 TNFAIP8L2Q6P589 184 aaPredicted RBP10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 TMPPEQ6ZT21 453 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 GALNT5Q7Z7M9 940 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 OR8J2Q8NGG1 315 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 ZNF563Q8TA94 476 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 XAGE5Q8WWM1 108 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 ROPN1LQ96C74 230 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 MDFIQ99750 246 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 C20orf27Q9GZN8 174 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 SLCO5A1Q9H2Y9 848 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 CTPS2Q9NRF8 586 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 NPAP1Q9NZP6 1156 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 ADAM21Q9UKJ8 722 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 SLC35A3Q9Y2D2 325 aa10.2□□□□□ -0.78
HMGCS1-204ENST00000507293 IGKV3D-15A0A087WSY6 115 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 SHISA9B4DS77 424 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 NDUFS7O75251 213 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 RAD51DO75771 328 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 IGHV4-39P01824 125 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 GUSBP08236 651 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 MYZAPP0CAP1 466 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 GGT1P19440 569 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 UQCRC2P22695 453 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 RYKP34925 604 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 ACVR1BP36896 505 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 KHKP50053 298 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 CDH11P55287 796 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 PHC1P78364 1004 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 SPANXN4Q5MJ08 99 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 TIMM23BQ5SRD1 257 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 ANXA8L1Q5VT79 327 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 SAXO2Q658L1 398 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 EMBQ6PCB8 327 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 DNAJC14Q6Y2X3 702 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 FRRS1Q6ZNA5 592 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 MTDHQ86UE4 582 aaKnown RBP10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 LSRQ86X29 649 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 OIT3Q8WWZ8 545 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 MUCL1Q96DR8 90 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 ZHX1-C8orf76Q96EF9 292 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 ARL5BQ96KC2 179 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 SLC35A5Q9BS91 424 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 TRAF4Q9BUZ4 470 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 TMEM109Q9BVC6 243 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 CCDC106Q9BWC9 280 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 REG4Q9BYZ8 158 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 ALG2Q9H553 416 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 POLE3Q9NRF9 147 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 CISD1Q9NZ45 108 aaKnown RBP10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 EMC3Q9P0I2 261 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 CHRNA9Q9UGM1 479 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 GDF2Q9UK05 429 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 NOSIPQ9Y314 301 aaKnown RBP10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 RAP2CQ9Y3L5 183 aa10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 SPIN1Q9Y657 262 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-204ENST00000507293 PRSS51A0A1B0GVH4 220 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 PRAMEF27A3QJZ7 478 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 OR5H1A6NKK0 313 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 CLDN24A6NM45 220 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 ZNF716A6NP11 495 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 ABCD4O14678 606 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 ANKRD28O15084 1053 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 ADAM11O75078 769 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 CRLF1O75462 422 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 PGM3O95394 542 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 PMS2P2O95744 297 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 CD8AP01732 235 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 C1QCP02747 245 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 CCNA2P20248 432 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 PTNP21246 168 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 CHI3L1P36222 383 aaPredicted RBP10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 APOBEC1P41238 236 aaKnown RBP10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 HPCAP84074 193 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 PLAURQ03405 335 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms