RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 OR10A4Q9H209 315 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 NOX3Q9HBY0 568 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 RIIAD1A6NNX1 92 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 ZNF879B4DU55 563 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 ARPC1BO15143 372 aaKnown RBP16.43■□□□□ 0.22
NUP54-205ENST00000507257 LDOC1O95751 146 aaPredicted RBP16.43■□□□□ 0.22
NUP54-205ENST00000507257 LPLP06858 475 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 ATP5A1P25705 553 aaKnown RBP16.43■□□□□ 0.22
NUP54-205ENST00000507257 RAD52P43351 418 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 GDI2P50395 445 aaKnown RBP16.43■□□□□ 0.22
NUP54-205ENST00000507257 PDX1P52945 283 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 RPS11P62280 158 aaKnown RBP eCLIP16.43■□□□□ 0.22
NUP54-205ENST00000507257 EEF1A1P68104 462 aaKnown RBP16.43■□□□□ 0.22
NUP54-205ENST00000507257 DUSP8Q13202 625 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 TMEM255AQ5JRV8 349 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 CFAP77Q6ZQR2 320 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 ESPNLQ6ZVH7 1005 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 LINGO2Q7L985 606 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 AMZ2Q86W34 360 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 OR52I2Q8NH67 350 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 CNOT9Q92600 299 aaKnown RBP16.43■□□□□ 0.22
NUP54-205ENST00000507257 PNPLA2Q96AD5 504 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 ZNF681Q96N22 645 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 CHIAQ9BZP6 476 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 PRDM7Q9NQW5 492 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 SPHK2Q9NRA0 654 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 CA10Q9NS85 328 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 CLEC4AQ9UMR7 237 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 HRH3Q9Y5N1 445 aa16.43■□□□□ 0.22
NUP54-205ENST00000507257 TBC1D3KA0A087X1G2 549 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 A0A0B4J203 849 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 A0A1W2PRU2 124 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 TBC1D3BA6NDS4 549 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 TBC1D3FA6NER0 549 aaPredicted RBP16.42■□□□□ 0.22
NUP54-205ENST00000507257 PDCD5O14737 125 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 PPM1DO15297 605 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 MID1O15344 667 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 GPRIN2O60269 458 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 FMO6PO60774 539 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 NDUFB6O95139 128 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 LYPD3O95274 346 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 AIFM1O95831 613 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 RAB40ALP0C0E4 278 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 ZNF3P17036 446 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 RAB3AP20336 220 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 MAKP20794 623 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 PSMB5P28074 263 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 CD96P40200 585 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 MC3RP41968 323 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 DLX5P56178 289 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 CST9Q5W186 159 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 TBC1D3GQ6DHY5 549 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 SLC25A25Q6KCM7 469 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 RPL22L1Q6P5R6 122 aaKnown RBP16.42■□□□□ 0.22
NUP54-205ENST00000507257 ABHD17CQ6PCB6 329 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 RPTNQ6XPR3 784 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 ZNF836Q6ZNA1 936 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 ADAMTS15Q8TE58 950 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 CYB5D2Q8WUJ1 264 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 TMEM239Q8WW34 195 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 FCAMRQ8WWV6 532 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 RAB40AQ8WXH6 277 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 MS4A6EQ96DS6 147 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 SLC35A4Q96G79 324 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.42■□□□□ 0.22
NUP54-205ENST00000507257 MED11Q9P086 117 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 SIGLEC7Q9Y286 467 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 ATG4BQ9Y4P1 393 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 IRAK3Q9Y616 596 aa16.42■□□□□ 0.22
NUP54-205ENST00000507257 TBC1D3EA0A087X179 549 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 A0A0G2JN53 185 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 GLOD5A6NK44 160 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 FCMRO60667 390 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 PRDX1Q06830 199 aaKnown RBP16.41■□□□□ 0.22
NUP54-205ENST00000507257 ARHGAP11BQ3KRB8 267 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 APOOLQ6UXV4 268 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 DNM1P46Q6ZS02 220 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 TMUB2Q71RG4 321 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 ACOT4Q8N9L9 421 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 OR13C5Q8NGS8 318 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 RPS4Y2Q8TD47 263 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 SEC22CQ9BRL7 303 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 C1QTNF6Q9BXI9 259 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 ENKD1Q9H0I2 346 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 TTYH1Q9H313 450 aaPredicted RBP16.41■□□□□ 0.22
NUP54-205ENST00000507257 CLDND1Q9NY35 253 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 KLF2Q9Y5W3 355 aaPredicted RBP16.41■□□□□ 0.22
NUP54-205ENST00000507257 NRG2O14511 850 aaPredicted RBP16.41■□□□□ 0.22
NUP54-205ENST00000507257 ABCD4O14678 606 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 PRKRAO75569 313 aaKnown RBP16.41■□□□□ 0.22
NUP54-205ENST00000507257 CLTBP09497 229 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 DPP4P27487 766 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 GK2Q14410 553 aaPredicted RBP16.41■□□□□ 0.22
NUP54-205ENST00000507257 UBXN2BQ14CS0 331 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 AGERQ15109 404 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 METRNLQ641Q3 311 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 PDZD9Q8IXQ8 264 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 LINC00518Q8N0U6 118 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 RAB42Q8N4Z0 105 aa16.41■□□□□ 0.22
NUP54-205ENST00000507257 OR5T2Q8NGG2 359 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms