RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 ATP4BP51164 291 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 SQLEQ14534 574 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 LIN52Q52LA3 116 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 AGKQ53H12 422 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 SYT14P1Q58G82 188 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 GRINAQ7Z429 371 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 CDC20BQ86Y33 519 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 FUNDC1Q8IVP5 155 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 SLC43A2Q8N370 569 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 OR52P1PQ8NH57 321 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 ABHD3Q8WU67 409 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 NRGNQ92686 78 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 SPDL1Q96EA4 605 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 THOC1Q96FV9 657 aaKnown RBP13.91□□□□□ -0.18
CLDND1-211ENST00000506575 KLHL4Q9C0H6 718 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 RABEP2Q9H5N1 569 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 C12orf49Q9H741 205 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 CTPS2Q9NRF8 586 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 TMEM45AQ9NWC5 275 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 KLHL28Q9NXS3 571 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 ZNF226Q9NYT6 803 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 CHRNA9Q9UGM1 479 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 TRIM33Q9UPN9 1127 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 TESMINQ9Y4I5 508 aa13.91□□□□□ -0.18
CLDND1-211ENST00000506575 SULT2B1O00204 365 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 TFPTP0C1Z6 253 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 RPS4Y1P22090 263 aaKnown RBP13.9□□□□□ -0.18
CLDND1-211ENST00000506575 ENPP1P22413 925 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 FKBP2P26885 142 aaKnown RBP13.9□□□□□ -0.18
CLDND1-211ENST00000506575 DNAJA1P31689 397 aaKnown RBP13.9□□□□□ -0.18
CLDND1-211ENST00000506575 CSNK2A1P68400 391 aaPredicted RBP13.9□□□□□ -0.18
CLDND1-211ENST00000506575 FADDQ13158 208 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 LARS2Q15031 903 aaKnown RBP13.9□□□□□ -0.18
CLDND1-211ENST00000506575 RGNQ15493 299 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 MRPL2Q5T653 305 aaKnown RBP13.9□□□□□ -0.18
CLDND1-211ENST00000506575 BEND4Q6ZU67 534 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 ZNF440Q8IYI8 595 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 SLC38A5Q8WUX1 472 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 TMEM19Q96HH6 336 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 WFIKKN1Q96NZ8 548 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 SIKE1Q9BRV8 207 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 TACO1Q9BSH4 297 aaKnown RBP13.9□□□□□ -0.18
CLDND1-211ENST00000506575 CCDC106Q9BWC9 280 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 ARMC7Q9H6L4 198 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 GP6Q9HCN6 339 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 NPHS2Q9NP85 383 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 KLHL9Q9P2J3 617 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 KLHL13Q9P2N7 655 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 DCTN4Q9UJW0 460 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 ZNF232Q9UNY5 417 aa13.9□□□□□ -0.18
CLDND1-211ENST00000506575 DSPPQ9NZW4 1301 aa13.9□□□□□ -0.19
CLDND1-211ENST00000506575 IGHV3-15A0A0B4J1V0 119 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 A0A0G2JPF8 293 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 CFAP73A6NFT4 308 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 HNRNPCL2B2RXH8 293 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 HNRNPCL3B7ZW38 293 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 C5orf58C9J3I9 102 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 AP3D1O14617 1153 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 HNRNPCL1O60812 293 aaKnown RBP13.89□□□□□ -0.19
CLDND1-211ENST00000506575 EDF1O60869 148 aaKnown RBP13.89□□□□□ -0.19
CLDND1-211ENST00000506575 YES1P07947 543 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 HNRNPCL4P0DMR1 293 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 PPIBP23284 216 aaKnown RBP13.89□□□□□ -0.19
CLDND1-211ENST00000506575 DIO1P49895 249 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 POU4F3Q15319 338 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 MAPK11Q15759 364 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 ZSWIM7Q19AV6 140 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 RPS26P11Q5JNZ5 115 aaPredicted RBP13.89□□□□□ -0.19
CLDND1-211ENST00000506575 LRIF1Q5T3J3 769 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 TMPPEQ6ZT21 453 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 VRK2Q86Y07 508 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 TUSC5Q8IXB3 177 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 STON2Q8WXE9 905 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 ZHX1-C8orf76Q96EF9 292 aa13.89□□□□□ -0.19
CLDND1-211ENST00000506575 CELSR1Q9NYQ6 3014 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 AKAP9Q99996 3911 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 TEP1Q99973 2627 aaKnown RBP13.88□□□□□ -0.19
CLDND1-211ENST00000506575 A0A0G2JND7 137 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 FAAHO00519 579 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 HRGP04196 525 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 FESP07332 822 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 CCNA2P20248 432 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 DNASE1P24855 282 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 SLC1A3P43003 542 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 CLK1P49759 484 aaKnown RBP13.88□□□□□ -0.19
CLDND1-211ENST00000506575 POLR2HP52434 150 aaKnown RBP13.88□□□□□ -0.19
CLDND1-211ENST00000506575 COPZ1P61923 177 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 PLAURQ03405 335 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 RASGEF1BQ0VAM2 473 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 EPS8Q12929 822 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 ZNF836Q6ZNA1 936 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 ZNF550Q7Z398 422 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 NINJ1Q92982 152 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 DDIT4LQ96D03 193 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 ZC3HAV1LQ96H79 300 aaKnown RBP13.88□□□□□ -0.19
CLDND1-211ENST00000506575 A4GALTQ9NPC4 353 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 RLIMQ9NVW2 624 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.88□□□□□ -0.19
CLDND1-211ENST00000506575 ST6GALNAC2Q9UJ37 374 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 CORO2BQ9UQ03 480 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms