RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CDC20BQ86Y33 519 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 VPS35Q96QK1 796 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 RANBP9Q96S59 729 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 PYGO2Q9BRQ0 406 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 TBC1D10AQ9BXI6 508 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 LPAR2Q9HBW0 351 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 FAM120CQ9NX05 1096 aaKnown RBP4.56□□□□□ -1.68
HERC4-213ENST00000506515 IMPAD1Q9NX62 359 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 ACACBO00763 2458 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 HCFC1P51610 2035 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 MYH4Q9Y623 1939 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 NAV1Q8NEY1 1877 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 EPG5Q9HCE0 2579 aa4.56□□□□□ -1.68
HERC4-213ENST00000506515 GVINP1Q7Z2Y8 2422 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 COL4A6Q14031 1691 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 MYH7BA7E2Y1 1941 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 LRRC30A6NM36 301 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 SDHDO14521 159 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 RNF113AO15541 343 aaKnown RBP4.55□□□□□ -1.68
HERC4-213ENST00000506515 CLDN3O15551 220 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 CALCBP10092 127 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 UQCRBP14927 111 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 SDC1P18827 310 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 HPDP32754 393 aaPredicted RBP4.55□□□□□ -1.68
HERC4-213ENST00000506515 NUCB2P80303 420 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 IL18R1Q13478 541 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 LHFPL4Q7Z7J7 247 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 PARGQ86W56 976 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 HPS6Q86YV9 775 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 CBWD2Q8IUF1 395 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 TYMSOSQ8TAI1 123 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 VN1R17PQ8TDU5 208 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 UPRTQ96BW1 309 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 BOLA2Q9H3K6 86 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 GPN2Q9H9Y4 310 aaPredicted RBP4.55□□□□□ -1.68
HERC4-213ENST00000506515 MEPEQ9NQ76 525 aaPredicted RBP4.55□□□□□ -1.68
HERC4-213ENST00000506515 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.55□□□□□ -1.68
HERC4-213ENST00000506515 RSPH14Q9UHP6 348 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 RAB23Q9ULC3 237 aa4.55□□□□□ -1.68
HERC4-213ENST00000506515 MYO5AQ9Y4I1 1855 aaKnown RBP4.55□□□□□ -1.68
HERC4-213ENST00000506515 FRYLO94915 3013 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 PLIN4Q96Q06 1357 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 TANC1Q9C0D5 1861 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 G3V3Y1 287 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 MBD3O95983 291 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 HEXBP07686 556 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 LAMP1P11279 417 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 ACVR1BP36896 505 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 DLSTP36957 453 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 MDH1P40925 334 aaKnown RBP4.54□□□□□ -1.68
HERC4-213ENST00000506515 NOVP48745 357 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 TAF6P49848 677 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 OSTNP61366 133 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 TIMM50Q3ZCQ8 353 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 ZNF311Q5JNZ3 666 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 NIPAL3Q6P499 406 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 TMCO2Q7Z6W1 182 aaPredicted RBP4.54□□□□□ -1.68
HERC4-213ENST00000506515 P2RY8Q86VZ1 359 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 SLC39A11Q8N1S5 342 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 STKLD1Q8NE28 680 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 DHTKD1Q96HY7 919 aaPredicted RBP4.54□□□□□ -1.68
HERC4-213ENST00000506515 ZNF416Q9BWM5 594 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 GSDMCQ9BYG8 508 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 NFKBIZQ9BYH8 718 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 AGPAT5Q9NUQ2 364 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 ELOVL2Q9NXB9 296 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 UTP6Q9NYH9 597 aaKnown RBP4.54□□□□□ -1.68
HERC4-213ENST00000506515 RDH8Q9NYR8 311 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 MFHAS1Q9Y4C4 1052 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 AP4B1Q9Y6B7 739 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 AP1M2Q9Y6Q5 423 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 RALGAPA1Q6GYQ0 2036 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 ATRXP46100 2492 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 BAZ2AQ9UIF9 1905 aaKnown RBP4.54□□□□□ -1.68
HERC4-213ENST00000506515 NLRC5Q86WI3 1866 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 DMXL1Q9Y485 3027 aa4.54□□□□□ -1.68
HERC4-213ENST00000506515 DMDP11532 3685 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 CCDC171Q6TFL3 1326 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 TM9SF1O15321 606 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 GPAA1O43292 621 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 GUCA1CO95843 209 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 JCHAINP01591 159 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 POLR2MP0CAP2 368 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 SMIM10L2AP0DMW4 78 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 SMIM10L2BP0DMW5 78 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 UMPSP11172 480 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 ANXA3P12429 323 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 IGFBP5P24593 272 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 OR1D4P47884 311 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 SLC26A2P50443 739 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 PLOD1Q02809 727 aaPredicted RBP4.53□□□□□ -1.68
HERC4-213ENST00000506515 PAX2Q02962 417 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 CYBRD1Q53TN4 286 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 LGSNQ5TDP6 509 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 RNLSQ5VYX0 342 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 SULT1C3Q6IMI6 304 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 ZNF774Q6NX45 483 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 LRRC8BQ6P9F7 803 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 ZNF573Q86YE8 665 aa4.53□□□□□ -1.68
HERC4-213ENST00000506515 ITPRIPQ8IWB1 547 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms