RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 JPT2Q9H910 190 aa2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 APMAPQ9HDC9 416 aa2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 TXLNGQ9NUQ3 528 aa2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 GNG12Q9UBI6 72 aa2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 ASIC3Q9UHC3 531 aa2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 MUTYHQ9UIF7 546 aa2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 BARX2Q9UMQ3 279 aaPredicted RBP2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 CLEC4AQ9UMR7 237 aa2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 MRPL11Q9Y3B7 192 aaKnown RBP2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 ASB3Q9Y575 518 aa2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 MAD1L1Q9Y6D9 718 aa2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 A0A0G2JMZ2 1700 aa2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 MYH2Q9UKX2 1941 aa2.62□□□□□ -1.99
TRAPPC11-205ENST00000506426 LTBP2Q14767 1821 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ATAD5Q96QE3 1844 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 MGAMO43451 1857 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 NAV1Q8NEY1 1877 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 A0A1W2PNV4 684 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ESYT2A0FGR8 921 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 METTL21EPA6NDL7 271 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 FOXI3A8MTJ6 420 aaPredicted RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 NPIPA7E9PJI5 369 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 LINC01565O15544 149 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF208O43345 1280 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 NDUFB10O96000 172 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 IL1BP01584 269 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 IGKV3-20P01619 116 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 HCKP08631 526 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 RNF224P0DH78 156 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 NPIPA8P0DM63 369 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 SDC1P18827 310 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 TBXA2RP21731 343 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ATP5A1P25705 553 aaKnown RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 POU3F4P49335 361 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 CEBPDP49716 269 aaPredicted RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 NOVA1P51513 510 aaKnown RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ACLYP53396 1101 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 IRX1P78414 480 aaPredicted RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 BEX3Q00994 111 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 EWSR1Q01844 656 aaKnown RBP eCLIP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 TNFRSF17Q02223 184 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 PLOD1Q02809 727 aaPredicted RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF33BQ06732 778 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 RGS1Q08116 209 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 DDX39BQ13838 428 aaKnown RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 GANABQ14697 944 aaKnown RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 PCK2Q16822 640 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 C14orf28Q4W4Y0 310 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 VWA2Q5GFL6 755 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 MS4A13Q5J8X5 152 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 SEL1L2Q5TEA6 688 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF613Q6PF04 617 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 GCNT7Q6ZNI0 430 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 TMEM179Q6ZVK1 233 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 EFL1Q7Z2Z2 1120 aaKnown RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 FBXO16Q8IX29 292 aaPredicted RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 PHC2Q8IXK0 858 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 UBQLNLQ8IYU4 475 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 SLC38A6Q8IZM9 456 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 SUMF1Q8NBK3 374 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 BHLHE23Q8NDY6 225 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 RFESDQ8TAC1 157 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 CNIH3Q8TBE1 160 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 FNDC8Q8TC99 324 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 CRYGNQ8WXF5 182 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 RPL3LQ92901 407 aaKnown RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 TUBGCP3Q96CW5 907 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 SH3YL1Q96HL8 342 aaPredicted RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF597Q96LX8 424 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 C9orf85Q96MD7 179 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 SECISBP2Q96T21 854 aaKnown RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 RIT2Q99578 217 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 TMEM121Q9BTD3 319 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 EDEM2Q9BV94 578 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 LRRC61Q9BV99 259 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 GCOM2Q9BZD3 368 aaPredicted RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 VCPKMTQ9H867 229 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF446Q9NWS9 450 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ELOVL2Q9NXB9 296 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 CTSZQ9UBR2 303 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 LCMT1Q9UIC8 334 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ANAPC7Q9UJX3 599 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 PTBP2Q9UKA9 531 aaKnown RBP2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 NPIPA1Q9UND3 350 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 PRUNE2Q8WUY3 3088 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ASTN1O14525 1302 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 ROBO3Q96MS0 1386 aa2.61□□□□□ -1.99
TRAPPC11-205ENST00000506426 AK9Q5TCS8 1911 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 XIRP2A4UGR9 3374 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 A0A087WYN8 130 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 OR6C65A6NJZ3 312 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 RPL37AP8A6NKH3 93 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 H0Y8G0 127 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 AP3B1O00203 1094 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 BTN3A3O00478 584 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 PRRG1O14668 218 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 GPAA1O43292 621 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 LCMT2O60294 686 aaKnown RBP2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 NMT2O60551 498 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 B4GALT2O60909 372 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms