RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 USP34Q70CQ2 3546 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 IGLV3-32A0A0A0MS00 114 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 KPNA4O00629 521 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 OIP5O43482 229 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 PIP5K1CO60331 668 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 ADAM11O75078 769 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 EPHA2P29317 976 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 TACR3P29371 465 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 CASP3P42574 277 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 GIPRP48546 466 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 HLCSP50747 726 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 MAP2K6P52564 334 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 NR1H2P55055 460 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 SNRPGP62308 76 aaKnown RBP10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 CDK5Q00535 292 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 CRYZQ08257 329 aaKnown RBP10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 ATP1A4Q13733 1029 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 GINS1Q14691 196 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 SLC22A10Q63ZE4 541 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 C12orf73Q69YU5 71 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 IL20RBQ6UXL0 311 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 WDR88Q6ZMY6 472 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 ZNF620Q6ZNG0 422 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 RTL4Q6ZR62 310 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 ATG4DQ86TL0 474 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 OAFQ86UD1 273 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 DTX1Q86Y01 620 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 CLEC1AQ8NC01 280 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 OR10G3Q8NGC4 313 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 OR4K17Q8NGC6 315 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 RHOXF1Q8NHV9 184 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 FANK1Q8TC84 345 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 BRIX1Q8TDN6 353 aaKnown RBP10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 GPR119Q8TDV5 335 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 IPCEF1Q8WWN9 437 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 TSSK6Q9BXA6 273 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 DPH1Q9BZG8 443 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 ADAM19Q9H013 955 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 RASSF1Q9NS23 344 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 MED17Q9NVC6 651 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 WDR70Q9NW82 654 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 IL20Q9NYY1 176 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 RNF6Q9Y252 685 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 SNX5Q9Y5X3 404 aa10.97□□□□□ -0.65
POLR2J3-211ENST00000506060 ZNF292O60281 2723 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 PTPRBP23467 1997 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 ENO4A6NNW6 628 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 SLC1A7O00341 560 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 GFRA3O60609 400 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 FAM20BO75063 409 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 SNX4O95219 450 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 P04436 131 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 HIST1H2ABP04908 130 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 CELA2AP08217 269 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 F8A1P23610 371 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 CRHBPP24387 322 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 ELK4P28324 431 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 APOBEC1P41238 236 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 RPL5P46777 297 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 GAS1P54826 345 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 IL10RAQ13651 578 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 RTP5Q14D33 572 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 QPRTQ15274 297 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 CTU2Q2VPK5 515 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 ACER2Q5QJU3 275 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 ABHD17BQ5VST6 288 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 MEDAGQ5VYS4 303 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 DESI1Q6ICB0 168 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 SMARCD3Q6STE5 483 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 HIST3H2AQ7L7L0 130 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 ENTHD1Q8IYW4 607 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 C10orf53Q8N6V4 93 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 BPIFB6Q8NFQ5 453 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 OR2T33Q8NG76 320 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 PFN4Q8NHR9 129 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 CNIH3Q8TBE1 160 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 ADAMTS17Q8TE56 1095 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 THAP4Q8WY91 577 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 HIST1H2ACQ93077 130 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 MYDGFQ969H8 173 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 NXPE2Q96DL1 559 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 THOC3Q96J01 351 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 POLDIP3Q9BY77 421 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 ASCL3Q9NQ33 180 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 PLCXD1Q9NUJ7 323 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 TVP23BQ9NYZ1 205 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 NDUFA13Q9P0J0 144 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 ZNF337Q9Y3M9 751 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 PCDHGB5Q9Y5G0 923 aa10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 SPIN1Q9Y657 262 aaPredicted RBP10.96□□□□□ -0.65
POLR2J3-211ENST00000506060 A0A087WZY1 265 aa10.95□□□□□ -0.66
POLR2J3-211ENST00000506060 TMED7-TICAM2A0A0A6YYA0 188 aa10.95□□□□□ -0.66
POLR2J3-211ENST00000506060 ANKRD33BA6NCL7 494 aa10.95□□□□□ -0.66
POLR2J3-211ENST00000506060 TRIM64A6NGJ6 449 aa10.95□□□□□ -0.66
POLR2J3-211ENST00000506060 EIF4E1BA6NMX2 242 aaKnown RBP10.95□□□□□ -0.66
POLR2J3-211ENST00000506060 ZNF354AO60765 605 aaPredicted RBP10.95□□□□□ -0.66
POLR2J3-211ENST00000506060 OR7A10O76100 309 aa10.95□□□□□ -0.66
POLR2J3-211ENST00000506060 ATP6V1B1P15313 513 aa10.95□□□□□ -0.66
POLR2J3-211ENST00000506060 MAKP20794 623 aa10.95□□□□□ -0.66
POLR2J3-211ENST00000506060 FKBP2P26885 142 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms