RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ATP5HO75947 161 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 POU3F2P20265 443 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 ACVR2AP27037 513 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 PTGER4P35408 488 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 APOBEC1P41238 236 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 HTR3AP46098 478 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 RGS8P57771 180 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 COPZ1P61923 177 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 SELENOWP63302 87 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 MERTKQ12866 999 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 SELENBP1Q13228 472 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 DNAL1Q4LDG9 190 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 LRRC23Q53EV4 343 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 C4orf17Q53FE4 359 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 GLYATQ6IB77 296 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 WBP2NLQ6ICG8 309 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 ULK2Q8IYT8 1036 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 EID3Q8N140 333 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 LSMEM1Q8N8F7 131 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 FAM156AQ8NDB6 213 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 ZPLD1Q8TCW7 415 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 PROX1Q92786 737 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 SLC7A6OSQ96CW6 309 aaPredicted RBP10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 ZNF559Q9BR84 538 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 TRIM2Q9C040 744 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 GORASP2Q9H8Y8 452 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 EGFL7Q9UHF1 273 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 TINAGQ9UJW2 476 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 CAMK2AQ9UQM7 478 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 RELNP78509 3460 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 GJE1A6NN92 205 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 E9PLN8 166 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 GYG2O15488 501 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 TPST2O60704 377 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 FMO6PO60774 539 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 GMNNO75496 209 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 NCK1P16333 377 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 TCN1P20061 433 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 IL11P20809 199 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 ME2P23368 584 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 FKBP2P26885 142 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 RASSF2P50749 326 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 POLR2HP52434 150 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 MAP2K6P52564 334 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 SUCLG1P53597 346 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 CLDN15P56746 228 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 CLDN20P56880 219 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 BNIP2Q12982 314 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 C1QL3Q5VWW1 255 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 ZNF585AQ6P3V2 769 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 ESPNLQ6ZVH7 1005 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 CBLL1Q75N03 491 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 GGNQ86UU5 652 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 ADGRG3Q86Y34 549 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 LILRA2Q8N149 483 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 MEIOBQ8N635 442 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 OR52E4Q8NGH9 312 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 OR6T1Q8NGN1 323 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 LZICQ8WZA0 190 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 UCN2Q96RP3 112 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 DMRTA2Q96SC8 542 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 VKORC1Q9BQB6 163 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 WFDC6Q9BQY6 131 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 BTBD10Q9BSF8 475 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 PCDHAC1Q9H158 963 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 SLC24A3Q9HC58 644 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 CTPS2Q9NRF8 586 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 SERINC1Q9NRX5 453 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 ADPRHL2Q9NX46 363 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 TESQ9UGI8 421 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 CHRNA9Q9UGM1 479 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 MAGEL2Q9UJ55 1249 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 OSGIN1Q9UJX0 560 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 SLC9A8Q9Y2E8 581 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 MEMO1Q9Y316 297 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 SNX13Q9Y5W8 968 aa10.72□□□□□ -0.69
PDLIM5-208ENST00000504489 TMED7-TICAM2A0A0A6YYA0 188 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 A0A0J9YW62 118 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 CD8B2A6NJW9 211 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 H0Y3Z8 333 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 M0R3H8 397 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 CCL21O00585 134 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 ADAMDEC1O15204 470 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 LRRTM2O43300 516 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 SERPINA1P01009 418 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 HTR2AP28223 471 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 TACR3P29371 465 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 MSX2P35548 267 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 CLK1P49759 484 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 RPS3AP61247 264 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 NCALDP61601 193 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 HOXC5Q00444 222 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 SRYQ05066 204 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 CTU2Q2VPK5 515 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 C1orf185Q5T7R7 199 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 RTL6Q6ICC9 239 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 TMEM211Q6ICI0 200 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 C3orf33Q6P1S2 294 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 ADGRE4PQ86SQ3 457 aa10.71□□□□□ -0.69
PDLIM5-208ENST00000504489 RANBP3LQ86VV4 465 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms