RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 FAM156AQ8NDB6 213 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 TAS2R16Q9NYV7 291 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 PCDHB14Q9Y5E9 798 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 COL14A1Q05707 1796 aaKnown RBP5.71□□□□□ -1.5
LINC02397-201ENST00000504409 ZNF705GA8MUZ8 300 aaPredicted RBP5.71□□□□□ -1.5
LINC02397-201ENST00000504409 SLC6A1P30531 599 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 BDKRB1P46663 353 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 PDZD11Q5EBL8 140 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 KIAA0907Q7Z7F0 614 aaPredicted RBP5.71□□□□□ -1.5
LINC02397-201ENST00000504409 MFSD4AQ8N468 514 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 ARRDC1Q8N5I2 433 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 GLYATL2Q8WU03 294 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 NHSQ6T4R5 1651 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 ST6GAL1P15907 406 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 SFTPDP35247 375 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 CTAG1AP78358 180 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 TAF1CQ15572 869 aaPredicted RBP5.71□□□□□ -1.5
LINC02397-201ENST00000504409 ADPRMQ3LIE5 342 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 FAM180BQ6P0A1 224 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 CD300LDQ6UXZ3 194 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 SIGLECL1Q8N7X8 197 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 HOXB13Q92826 284 aaPredicted RBP5.71□□□□□ -1.5
LINC02397-201ENST00000504409 OR2A14Q96R47 310 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 SLC12A9Q9BXP2 914 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 SMOC2Q9H3U7 446 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 PIF1Q9H611 641 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 IKZF2Q9UKS7 526 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 ASF1AQ9Y294 204 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 SLC35E2BP0CK96 405 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 CREB1P16220 341 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 GABRB1P18505 474 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 MAP2K6P52564 334 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 CBFBQ13951 182 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 SSX1Q16384 188 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 OR52W1Q6IF63 320 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 DTWD2Q8NBA8 298 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 C22orf15Q8WYQ4 148 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 SPATA31A3Q5VYP0 1347 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 C7orf66A4D0T2 115 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 PRSS23O95084 383 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 CST4P01036 141 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 MT-ND6P03923 174 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 GALTP07902 379 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 CD3GP09693 182 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 GIFP27352 417 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 TIA1P31483 386 aaKnown RBP eCLIP5.71□□□□□ -1.5
LINC02397-201ENST00000504409 ARFRP1Q13795 201 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 PMCHL1Q16048 86 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 Q499Y3 187 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 LRRC73Q5JTD7 316 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 LSRQ86X29 649 aaPredicted RBP5.71□□□□□ -1.5
LINC02397-201ENST00000504409 NANOGP1Q8N7R0 232 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 UBAC2Q8NBM4 344 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 KTI12Q96EK9 354 aaPredicted RBP5.71□□□□□ -1.5
LINC02397-201ENST00000504409 SCLYQ96I15 445 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 ZNF582Q96NG8 517 aaPredicted RBP5.71□□□□□ -1.5
LINC02397-201ENST00000504409 A8MX80 341 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 RNF225M0QZC1 329 aaPredicted RBP5.71□□□□□ -1.5
LINC02397-201ENST00000504409 LTKP29376 864 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 TPBGQ13641 420 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 KIAA0319Q5VV43 1072 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 CLEC6AQ6EIG7 209 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 FAHD1Q6P587 224 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 CNKSR3Q6P9H4 555 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 DTWD1Q8N5C7 304 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 COPS9Q8WXC6 57 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 ST8SIA2Q92186 375 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 ADIPOR1Q96A54 375 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 CASD1Q96PB1 797 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 SYT11Q9BT88 431 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 PARP11Q9NR21 331 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.71□□□□□ -1.5
LINC02397-201ENST00000504409 CTSFQ9UBX1 484 aa5.71□□□□□ -1.5
LINC02397-201ENST00000504409 GPR171O14626 319 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SLC6A8P48029 635 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 PIGPP57054 158 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ARF3P61204 181 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ARF1P84077 181 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 BAXQ07812 192 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 MAP2K5Q13163 448 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 NPAS4Q8IUM7 802 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 OLIG1Q8TAK6 271 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 CD200R1Q8TD46 325 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 TMEM234Q8WY98 164 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 USB1Q9BQ65 265 aaKnown RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 GBA2Q9HCG7 927 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 PPT2Q9UMR5 302 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 LGALS8O00214 317 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 FMO6PO60774 539 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 SLC25A4P12235 298 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 CD1CP29017 333 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 CSNK1A1P48729 337 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ZNF84P51523 738 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 MAXP61244 160 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 ZNF273Q14593 569 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 NLRC3Q7RTR2 1065 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 LRRTM3Q86VH5 581 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 OR51A2Q8NGJ7 313 aa5.7□□□□□ -1.5
LINC02397-201ENST00000504409 FCRL2Q96LA5 508 aaPredicted RBP5.7□□□□□ -1.5
LINC02397-201ENST00000504409 BEX1Q9HBH7 125 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms