RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 ZNF620Q6ZNG0 422 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 Q6ZVL8 140 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TTLL10Q6ZVT0 673 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 Q6ZVU0 165 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC16A14Q7RTX9 510 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 PPP1R3BQ86XI6 285 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CMTR2Q8IYT2 770 aaKnown RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 GPR137CQ8N3F9 429 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SAMD12Q8N8I0 201 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 COX18Q8N8Q8 333 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF454Q8N9F8 522 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 GATSQ8NAP1 163 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 OR5M3Q8NGP4 307 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 OR2T4Q8NH00 348 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SETD6Q8TBK2 473 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 WDR20Q8TBZ3 569 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SPPL2BQ8TCT7 592 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 NR4A3Q92570 626 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SLCO2A1Q92959 643 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 MAL2Q969L2 176 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 JSRP1Q96MG2 331 aaPredicted RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TMEM56Q96MV1 263 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC46A1Q96NT5 459 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ERMAPQ96PL5 475 aaPredicted RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 FRG2BQ96QU4 278 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 FCRL5Q96RD9 977 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CCNL2Q96S94 520 aaPredicted RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ATP6V0BQ99437 205 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 GPR22Q99680 433 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ITPAQ9BY32 194 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SMG9Q9H0W8 520 aaKnown RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 EXO5Q9H790 373 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 EVA1AQ9H8M9 152 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 NUDT4Q9NZJ9 180 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 DEC1Q9P2X7 70 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 NCKAP1Q9Y2A7 1128 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 HIF3AQ9Y2N7 669 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 PCDHB1Q9Y5F3 818 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TIMM8BQ9Y5J9 83 aaPredicted RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TMEM56-RWDD3S4R434 201 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TSC2P49815 1807 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ROS1P08922 2347 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 EVPLQ92817 2033 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 TCRBV3S1A0A5B6 114 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 TMEM189-UBE2V1I3L0A0 370 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 PHOX2AO14813 284 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 EEF1E1O43324 174 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 ERI3O43414 337 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 DOK2O60496 412 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 RAD1O60671 282 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 HIST1H1BP16401 226 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 GRPRP30550 384 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 RPL3P39023 403 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 CD79BP40259 229 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 RPS5P46782 204 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 OR3A2P47893 321 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 CDH11P55287 796 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 EEFSECP57772 596 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 MAB21L1Q13394 359 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 DCAF10Q5QP82 559 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 RBM48Q5RL73 367 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 C1orf94Q6P1W5 598 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF773Q6PK81 442 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 ENPP6Q6UWR7 440 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 CHST9Q7L1S5 443 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 SSX9Q7RTT3 188 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 SPRED1Q7Z699 444 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 RANBP3LQ86VV4 465 aaPredicted RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 WDTC1Q8N5D0 677 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 NUDT10Q8NFP7 164 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 OR52N2Q8NGI0 321 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 DNAJA4Q8WW22 397 aaPredicted RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 LCN9Q8WX39 176 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 PYURFQ96I23 114 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 MSLNLQ96KJ4 702 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC35G5Q96KT7 338 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 SMIM14Q96QK8 99 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 DIRC2Q96SL1 478 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 MGLLQ99685 303 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 TXN2Q99757 166 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 RIOK2Q9BVS4 552 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 REPIN1Q9BWE0 567 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF471Q9BX82 626 aaPredicted RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 RNF32Q9H0A6 362 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 CST11Q9H112 138 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 MMP28Q9H239 520 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 PPIL3Q9H2H8 161 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 FZD8Q9H461 694 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 CDCP1Q9H5V8 836 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 TREX1Q9NSU2 369 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 OBP2AQ9NY56 170 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 COPZ2Q9P299 210 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 DLGAP4Q9Y2H0 992 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 NOP16Q9Y3C1 178 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 RANBP2P49792 3224 aaKnown RBP3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 LOC105369274A0A096LPK9 316 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 SMIM35A0A1B0GVV1 85 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 CD8B2A6NJW9 211 aa3.42□□□□□ -1.86
PCDH11X-208ENST00000504220 MEIS3P2A8K0S8 358 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms