RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ARFGAP2Q8N6H7 521 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 GLB1L3Q8NCI6 653 aaPredicted RBP10.64□□□□□ -0.71
MED28-203ENST00000503945 MGARPQ8TDB4 240 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 ZNF524Q96C55 264 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 TEX37Q96LM6 180 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 TRNT1Q96Q11 434 aaKnown RBP10.64□□□□□ -0.71
MED28-203ENST00000503945 CCL19Q99731 98 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 QRSL1Q9H0R6 528 aaKnown RBP10.64□□□□□ -0.71
MED28-203ENST00000503945 GPR45Q9Y5Y3 372 aa10.64□□□□□ -0.71
MED28-203ENST00000503945 SPIN1Q9Y657 262 aaPredicted RBP10.64□□□□□ -0.71
MED28-203ENST00000503945 DSCAMO60469 2012 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 IGHV3-15A0A0B4J1V0 119 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 GOLGA8QA0A0J9YX86 632 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 GOLGA8OA6NCC3 632 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 KIAA1324LA8MWY0 1029 aaPredicted RBP10.63□□□□□ -0.71
MED28-203ENST00000503945 C9JVG2 144 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 GOLGA8NF8WBI6 632 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 HMGN4O00479 90 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 SDHDO14521 159 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 H6PDO95479 791 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 KRT75O95678 551 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 HEXAP06865 529 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 NID1P14543 1247 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 IL7RP16871 459 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 IL32P24001 234 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 EPHA3P29320 983 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 HTR3AP46098 478 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 CLK1P49759 484 aaKnown RBP10.63□□□□□ -0.71
MED28-203ENST00000503945 DIO1P49895 249 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 MAGOHP61326 146 aaKnown RBP10.63□□□□□ -0.71
MED28-203ENST00000503945 CHRNEQ04844 493 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 ITGADQ13349 1161 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 GALNT5Q7Z7M9 940 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 MTDHQ86UE4 582 aaKnown RBP10.63□□□□□ -0.71
MED28-203ENST00000503945 ZNF100Q8IYN0 542 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 GABRG1Q8N1C3 465 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 CIARTQ8N365 385 aaPredicted RBP10.63□□□□□ -0.71
MED28-203ENST00000503945 RAB3IL1Q8TBN0 382 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 SLC25A43Q8WUT9 341 aaPredicted RBP10.63□□□□□ -0.71
MED28-203ENST00000503945 PMM1Q92871 262 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 S100PBPQ96BU1 408 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 ZNF775Q96BV0 537 aaPredicted RBP10.63□□□□□ -0.71
MED28-203ENST00000503945 PLPPR2Q96GM1 343 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 MARK4Q96L34 752 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 HS3ST6Q96QI5 342 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 MDFIQ99750 246 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 BCO1Q9HAY6 547 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 AIG1Q9NVV5 245 aa10.63□□□□□ -0.71
MED28-203ENST00000503945 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.62□□□□□ -0.71
MED28-203ENST00000503945 ZNF724A8MTY0 619 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 RFXANKO14593 260 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 KIAA0513O60268 411 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 CYTIPO60759 359 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 SNNO75324 88 aaPredicted RBP10.62□□□□□ -0.71
MED28-203ENST00000503945 GCM2O75603 506 aaPredicted RBP10.62□□□□□ -0.71
MED28-203ENST00000503945 GSNP06396 782 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 ALDOCP09972 364 aaKnown RBP10.62□□□□□ -0.71
MED28-203ENST00000503945 NR2F1P10589 423 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 IDO1P14902 403 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 IL12AP29459 219 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 IDH2P48735 452 aaKnown RBP10.62□□□□□ -0.71
MED28-203ENST00000503945 CAPRIN1Q14444 709 aaKnown RBP10.62□□□□□ -0.71
MED28-203ENST00000503945 SYPL1Q16563 259 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 PRSS57Q6UWY2 283 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 TFAP2EQ6VUC0 442 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 FRRS1Q6ZNA5 592 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 LRRC74BQ6ZQY2 392 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 GRINAQ7Z429 371 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 ADGRG3Q86Y34 549 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 CMIPQ8IY22 773 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 KISS1RQ969F8 398 aaPredicted RBP10.62□□□□□ -0.71
MED28-203ENST00000503945 ZHX1-C8orf76Q96EF9 292 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 INPP5KQ9BT40 448 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 BDH2Q9BUT1 245 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 CCDC106Q9BWC9 280 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 ESRP2Q9H6T0 727 aaKnown RBP10.62□□□□□ -0.71
MED28-203ENST00000503945 RMND5AQ9H871 391 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 COQ10BQ9H8M1 238 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 EXOSC3Q9NQT5 275 aaKnown RBP10.62□□□□□ -0.71
MED28-203ENST00000503945 PRDM4Q9UKN5 801 aa10.62□□□□□ -0.71
MED28-203ENST00000503945 JMJD1CQ15652 2540 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 NUP214P35658 2090 aaPredicted RBP10.61□□□□□ -0.71
MED28-203ENST00000503945 CENPVL1A0A0U1RR11 272 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 AGAP5A6NIR3 686 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 ZNF814B7Z6K7 855 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 ANP32DO95626 131 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 FESP07332 822 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 UQCRBP14927 111 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 CCNA2P20248 432 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 LOXP28300 417 aaPredicted RBP10.61□□□□□ -0.71
MED28-203ENST00000503945 MAGEA8P43361 318 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 OR3A2P47893 321 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 MAP2K6P52564 334 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 PDK3Q15120 406 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 TSC22D1Q15714 1073 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 GSTA3Q16772 222 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 SYT14P1Q58G82 188 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 ZNF704Q6ZNC4 412 aaPredicted RBP10.61□□□□□ -0.71
MED28-203ENST00000503945 Q6ZT83 130 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 BHLHA15Q7RTS1 189 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms