RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PHOX2BQ99453 314 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 MESP1Q9BRJ9 268 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 C12orf10Q9HB07 376 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.13■□□□□ 0.81
PTPN13-205ENST00000502971 NPFFR2Q9Y5X5 522 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 TRBV11-1A0A0K0K1C0 115 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 TMX2-CTNND1H3BSU7 103 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 BHLHE40O14503 412 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 IGF2P01344 180 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 SLC26A5P58743 744 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 KLHL22Q53GT1 634 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 FAM198BQ6UWH4 519 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 ZNF517Q6ZMY9 492 aaPredicted RBP20.13■□□□□ 0.81
PTPN13-205ENST00000502971 SLC16A12Q6ZSM3 486 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 ZNF367Q7RTV3 350 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 ATG4DQ86TL0 474 aaPredicted RBP20.13■□□□□ 0.81
PTPN13-205ENST00000502971 OAFQ86UD1 273 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 LNX2Q8N448 690 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 RFKQ969G6 155 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 STRADBQ9C0K7 418 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 BAIAP2Q9UQB8 552 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 GPR52Q9Y2T5 361 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 COL27A1Q8IZC6 1860 aaPredicted RBP20.12■□□□□ 0.81
PTPN13-205ENST00000502971 LOC102723996A0A087X1L8 192 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 ELOA3DA6NLF2 546 aaPredicted RBP20.12■□□□□ 0.81
PTPN13-205ENST00000502971 FADS1O60427 444 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 CH25HO95992 272 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 NAGAP17050 411 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 EVI2BP34910 448 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 SLC9A3P48764 834 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 RAB15P59190 212 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 E2F1Q01094 437 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 ZNF117Q03924 483 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 TIGD6Q17RP2 521 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 ELOA3BQ3SY89 546 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 MARCH3Q86UD3 253 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 ELOA3Q8NG57 546 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 CDC6Q99741 560 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 TMEM43Q9BTV4 400 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 IL20RAQ9UHF4 553 aa20.12■□□□□ 0.81
PTPN13-205ENST00000502971 ZFAND5O76080 213 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 GABARAPO95166 117 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 PTHP01270 115 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 DCAF12Q5T6F0 453 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 AADACL4Q5VUY2 407 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 FAM199XQ6PEV8 388 aaPredicted RBP20.11■□□□□ 0.81
PTPN13-205ENST00000502971 RTL4Q6ZR62 310 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 MISPQ8IVT2 679 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 ZNF563Q8TA94 476 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 ZFAND2BQ8WV99 257 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 PMEPA1Q969W9 287 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 RTN4RQ9BZR6 473 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 FN3KQ9H479 309 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 ZBTB20Q9HC78 741 aaPredicted RBP20.11■□□□□ 0.81
PTPN13-205ENST00000502971 LOXL2Q9Y4K0 774 aa20.11■□□□□ 0.81
PTPN13-205ENST00000502971 TRAV27A0A087WT01 109 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 C4orf47A7E2U8 309 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 M0R082 166 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 GNB5O14775 395 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 HCRTR2O43614 444 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 CBFA2T3O75081 653 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 ADRA2AP08913 450 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 SLC1A3P43003 542 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 MLLT10P55197 1068 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 RAB40BQ12829 278 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 NXNL2Q5VZ03 156 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 P2RY8Q86VZ1 359 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 OR51A7Q8NH64 312 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 C8orf44Q96CB5 159 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 ZPBPQ9BS86 351 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 IFT27Q9BW83 186 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 DIMT1Q9UNQ2 313 aaKnown RBP20.1■□□□□ 0.81
PTPN13-205ENST00000502971 ERGIC3Q9Y282 383 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 RAB36O95755 333 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 SLC6A6P31641 620 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 CTF1Q16619 201 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 THSD4Q6ZMP0 1018 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 OR52I1Q8NGK6 324 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 OR5W2Q8NH69 310 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 TNFRSF13CQ96RJ3 184 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 ADAM19Q9H013 955 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 ENKD1Q9H0I2 346 aa20.1■□□□□ 0.81
PTPN13-205ENST00000502971 FGF20Q9NP95 211 aaPredicted RBP20.1■□□□□ 0.81
PTPN13-205ENST00000502971 A0A1W2PPW3 197 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 TMEM200CA6NKL6 621 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 CD63P08962 238 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 CD36P16671 472 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 PGCP20142 388 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 MTNR1AP48039 350 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 CDH11P55287 796 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 NFATC3Q12968 1075 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 FHL1Q13642 323 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 CBFBQ13951 182 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 AMER2Q8N7J2 671 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 GALNT6Q8NCL4 622 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 TMCO6Q96DC7 493 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 LGALS12Q96DT0 336 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 RNFT2Q96EX2 444 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 SH3YL1Q96HL8 342 aaPredicted RBP20.09■□□□□ 0.81
PTPN13-205ENST00000502971 RACGAP1Q9H0H5 632 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms