RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 CGGBP1Q9UFW8 167 aaPredicted RBP4.9□□□□□ -1.63
SPTA1-209ENST00000498708 PLA2G2DQ9UNK4 145 aa4.9□□□□□ -1.63
SPTA1-209ENST00000498708 MYRFQ9Y2G1 1151 aa4.9□□□□□ -1.63
SPTA1-209ENST00000498708 WBP11Q9Y2W2 641 aaKnown RBP4.9□□□□□ -1.63
SPTA1-209ENST00000498708 EMC9Q9Y3B6 208 aa4.9□□□□□ -1.63
SPTA1-209ENST00000498708 MRPS18CQ9Y3D5 142 aaKnown RBP4.9□□□□□ -1.63
SPTA1-209ENST00000498708 POLR3HQ9Y535 204 aaPredicted RBP4.9□□□□□ -1.63
SPTA1-209ENST00000498708 LYSTQ99698 3801 aa4.9□□□□□ -1.63
SPTA1-209ENST00000498708 DNAH1Q9P2D7 4330 aa4.9□□□□□ -1.63
SPTA1-209ENST00000498708 A0A0J9YW62 118 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 MYO1GB0I1T2 1018 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 C9JVG2 144 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 GOLGA8RI6L899 631 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 UPK1AO00322 258 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 DLX3O60479 287 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 PLOD3O60568 738 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 ULK1O75385 1050 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 UTS2O95399 124 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 IL33O95760 270 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 IGKV1D-16P01601 117 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 CD8AP01732 235 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 ANXA4P09525 319 aaPredicted RBP4.89□□□□□ -1.63
SPTA1-209ENST00000498708 TAC1P20366 129 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 IL11P20809 199 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 EFNA1P20827 205 aaPredicted RBP4.89□□□□□ -1.63
SPTA1-209ENST00000498708 NTSP30990 170 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 GABRA3P34903 492 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 MPIP34949 423 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 SFTPDP35247 375 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 PSMD7P51665 324 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 FOXA1P55317 472 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 MRPS22P82650 360 aaKnown RBP4.89□□□□□ -1.63
SPTA1-209ENST00000498708 ZNF844Q08AG5 666 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 HSPB3Q12988 150 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 CSTF3Q12996 717 aaKnown RBP4.89□□□□□ -1.63
SPTA1-209ENST00000498708 HEPACAMQ14CZ8 416 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 ZNHIT3Q15649 155 aaPredicted RBP4.89□□□□□ -1.63
SPTA1-209ENST00000498708 IMPG1Q17R60 797 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 DPY19L1Q2PZI1 675 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 GRAMD1BQ3KR37 738 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 ZNF678Q5SXM1 525 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 ANKRD26P1Q6NSI1 321 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 C8orf74Q6P047 294 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 METTL2BQ6P1Q9 378 aaKnown RBP4.89□□□□□ -1.63
SPTA1-209ENST00000498708 SYT10Q6XYQ8 523 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 GPRIN3Q6ZVF9 776 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 ZNF551Q7Z340 670 aaPredicted RBP4.89□□□□□ -1.63
SPTA1-209ENST00000498708 NUFIP2Q7Z417 695 aaKnown RBP4.89□□□□□ -1.63
SPTA1-209ENST00000498708 CCNYL1Q8N7R7 359 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 BANPQ8N9N5 519 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 KBTBD8Q8NFY9 601 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 OR6K3Q8NGY3 331 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 OR10D3Q8NH80 312 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 OR2W6PQ8NHA6 318 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 GPR151Q8TDV0 419 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 ACMSDQ8TDX5 336 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 SMAP2Q8WU79 429 aaPredicted RBP4.89□□□□□ -1.63
SPTA1-209ENST00000498708 RNF138Q8WVD3 245 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 IFT81Q8WYA0 676 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 HTRA1Q92743 480 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 S100PBPQ96BU1 408 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 ANAPC16Q96DE5 110 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 THOC1Q96FV9 657 aaKnown RBP4.89□□□□□ -1.63
SPTA1-209ENST00000498708 CHMP6Q96FZ7 201 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 RNF145Q96MT1 663 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 TMEM237Q96Q45 408 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 PKP2Q99959 881 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 MRPL57Q9BQC6 102 aaKnown RBP4.89□□□□□ -1.63
SPTA1-209ENST00000498708 SHCBP1LQ9BZQ2 653 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 GLIPR2Q9H4G4 154 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 MIEF1Q9NQG6 463 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 PLSCR4Q9NRQ2 329 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 FBXO34Q9NWN3 711 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 MCTS1Q9ULC4 181 aaKnown RBP4.89□□□□□ -1.63
SPTA1-209ENST00000498708 TMCO1Q9UM00 188 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 ZNF175Q9Y473 711 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 AP4B1Q9Y6B7 739 aa4.89□□□□□ -1.63
SPTA1-209ENST00000498708 TENM3Q9P273 2699 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 DNAH9Q9NYC9 4486 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 IGHV3-15A0A0B4J1V0 119 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 NPIPA5A0A0B4J1W7 369 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 A0A1W2PP18 115 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 A0A1W2PRB8 838 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 NPIPA7E9PJI5 369 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 AKAP10O43572 662 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 SS18L1O75177 396 aaPredicted RBP4.88□□□□□ -1.63
SPTA1-209ENST00000498708 CRCPO75575 148 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 KCNH1O95259 989 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 OXSR1O95747 527 aaPredicted RBP4.88□□□□□ -1.63
SPTA1-209ENST00000498708 NUDT14O95848 222 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 ADAP00813 363 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 TUBBP07437 444 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 NPIPA8P0DM63 369 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 FCGR2AP12318 317 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 HSD3B1P14060 373 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 DDCP20711 480 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 IL32P24001 234 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 HSD3B2P26439 372 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 SHC1P29353 583 aa4.88□□□□□ -1.63
SPTA1-209ENST00000498708 AGTR1P30556 359 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms