RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 CYTIPO60759 359 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 BCAS1O75363 584 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 ANP32DO95626 131 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 KRT75O95678 551 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 THBDP07204 575 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 YES1P07947 543 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 CHRM4P08173 479 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 NR2F1P10589 423 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 FPR1P21462 350 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 LOXP28300 417 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 RYKP34925 604 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 APOBEC1P41238 236 aaKnown RBP7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 DIO1P49895 249 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 CSNK2A1P68400 391 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 RASGEF1BQ0VAM2 473 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 FOXD4Q12950 439 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 ACKR1Q16570 336 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 SYT14P1Q58G82 188 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 BEX5Q5H9J7 111 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 COX20Q5RI15 118 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 AGBL2Q5U5Z8 902 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 LRRC74BQ6ZQY2 392 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 GRINAQ7Z429 371 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 CXorf67Q86X51 503 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 CMIPQ8IY22 773 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 ANKFN1Q8N957 763 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 STEAP2Q8NFT2 490 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 PNPT1Q8TCS8 783 aaKnown RBP7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 ZNF75CPQ92670 426 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 TRNT1Q96Q11 434 aaKnown RBP7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 PSD2Q9BQI7 771 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 CCDC106Q9BWC9 280 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 HDHD5Q9BXW7 423 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 ACTR6Q9GZN1 396 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 SLC38A1Q9H2H9 487 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 UBTD1Q9HAC8 227 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 BCO1Q9HAY6 547 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 EXOSC3Q9NQT5 275 aaKnown RBP7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 CTPS2Q9NRF8 586 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 ZIM2Q9NZV7 527 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 CHRNA9Q9UGM1 479 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 SPIN1Q9Y657 262 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 HIVEP1P15822 2718 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 AGAP5A6NIR3 686 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 UBDO15205 165 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 KLF4O43474 513 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 DIAPH2O60879 1101 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 GCM2O75603 506 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 FESP07332 822 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 ZCCHC18P0CG32 403 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 TFPIP10646 304 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 IL7RP16871 459 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 RPS4Y1P22090 263 aaKnown RBP7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 FKBP2P26885 142 aaKnown RBP7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 HOXC12P31275 282 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 MAGEA8P43361 318 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 IDH2P48735 452 aaKnown RBP7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 POLR2JP52435 117 aaKnown RBP7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 NR1H2P55055 460 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 NKX6-1P78426 367 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 PLAURQ03405 335 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 GNA13Q14344 377 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 SFRP5Q5T4F7 317 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 SHEQ5VZ18 495 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 DNAJC14Q6Y2X3 702 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 C20orf204Q6ZNR8 217 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 TMPPEQ6ZT21 453 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 MSANTD1Q6ZTZ1 278 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 MAVSQ7Z434 540 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 WFDC8Q8IUA0 241 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 GABRG1Q8N1C3 465 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 WFDC11Q8NEX6 87 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 WDR60Q8WVS4 1066 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 CNOT9Q92600 299 aaKnown RBP7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 PMM1Q92871 262 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 PIGTQ969N2 578 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 S100PBPQ96BU1 408 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 ZHX1-C8orf76Q96EF9 292 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 PLPPR2Q96GM1 343 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 OR52B2Q96RD2 323 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 ZNF300Q96RE9 604 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 CCL19Q99731 98 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 PIP5K1AQ99755 562 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 RMND5AQ9H871 391 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 MTHFD2LQ9H903 347 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 SDR39U1Q9NRG7 319 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 SLC6A13Q9NSD5 602 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 P2RX2Q9UBL9 471 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 ING1Q9UK53 422 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 USH1CQ9Y6N9 552 aa7.53□□□□□ -1.2
HMGXB4-207ENST00000498212 PRR14LQ5THK1 2151 aa7.52□□□□□ -1.21
HMGXB4-207ENST00000498212 ZNF724A8MTY0 619 aa7.52□□□□□ -1.21
HMGXB4-207ENST00000498212 ZNF814B7Z6K7 855 aa7.52□□□□□ -1.21
HMGXB4-207ENST00000498212 AP3D1O14617 1153 aa7.52□□□□□ -1.21
HMGXB4-207ENST00000498212 SMPD2O60906 423 aa7.52□□□□□ -1.21
HMGXB4-207ENST00000498212 ADAM11O75078 769 aa7.52□□□□□ -1.21
HMGXB4-207ENST00000498212 PMS2P2O95744 297 aa7.52□□□□□ -1.21
HMGXB4-207ENST00000498212 ADAP00813 363 aa7.52□□□□□ -1.21
HMGXB4-207ENST00000498212 BCHEP06276 602 aa7.52□□□□□ -1.21
HMGXB4-207ENST00000498212 DBIP07108 87 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms