RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 FKBP14Q9NWM8 211 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 GPR83Q9NYM4 423 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 PTTG2Q9NZH5 202 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 CNOT2Q9NZN8 540 aaKnown RBP7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 WARS2Q9UGM6 360 aaKnown RBP7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 PCDHGA1Q9Y5H4 931 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 NPFFR2Q9Y5X5 522 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 CEPT1Q9Y6K0 416 aa7.39□□□□□ -1.23
PDZRN3-212ENST00000498048 A0A087WUJ7 227 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 IGHV1-45A0A0A0MS14 117 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 SNTNA6NMZ2 147 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 ZNF99A8MXY4 864 aaPredicted RBP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 TNFRSF10AO00220 468 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 PLD2O14939 933 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 SURF4O15260 269 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 MAN1A2O60476 641 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 CDC40O60508 579 aaKnown RBP eCLIP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 EIF4E2O60573 245 aaKnown RBP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 LRP3O75074 770 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 ENTPD6O75354 484 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 SEC14L2O76054 403 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 ZFAND5O76080 213 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 RCBTB2O95199 551 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 CH25HO95992 272 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 MT-CO3P00414 261 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 IGHEP01854 428 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 UMODP07911 640 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 ADORA3P0DMS8 318 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 PNMTP11086 282 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 BMP7P18075 431 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 PGCP20142 388 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 DCKP27707 260 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 SLC6A6P31641 620 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 GIPRP48546 466 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 GP2P55259 537 aaKnown RBP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 SH3BGRP55822 239 aaPredicted RBP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 FBXW4P57775 412 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 TUBA3CQ13748 450 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 CBFBQ13951 182 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 EXT1Q16394 746 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 CSRP2Q16527 193 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 OCLNQ16625 522 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 TMEM44Q2T9K0 475 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 SYT14P1Q58G82 188 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 GPR107Q5VW38 600 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 MEDAGQ5VYS4 303 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 ACSM5Q6NUN0 579 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 ARHGAP11AQ6P4F7 1023 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 SMARCD3Q6STE5 483 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 CBLN3Q6UW01 205 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 DHRS13Q6UX07 377 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 C6orf15Q6UXA7 325 aaPredicted RBP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 APOOLQ6UXV4 268 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 ZNF517Q6ZMY9 492 aaPredicted RBP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 C16orf47Q6ZP98 133 aaPredicted RBP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 TMPRSS11FQ6ZWK6 438 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 ZNF367Q7RTV3 350 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 MRGPREQ86SM8 312 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 ATG4DQ86TL0 474 aaPredicted RBP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 MARCH3Q86UD3 253 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 MISPQ8IVT2 679 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 CACTIN-AS1Q8N1I8 211 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 SLC43A2Q8N370 569 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 OR5M3Q8NGP4 307 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 C9orf43Q8TAL5 461 aaPredicted RBP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 ZNF420Q8TAQ5 688 aaPredicted RBP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 CT55Q8WUE5 264 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 TRUB1Q8WWH5 349 aaKnown RBP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 TMCO6Q96DC7 493 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 SGTBQ96EQ0 304 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 LRR1Q96L50 414 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 TMEM43Q9BTV4 400 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 DEFB126Q9BYW3 111 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 ZNF700Q9H0M5 742 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 PARD6AQ9NPB6 346 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 ACOT13Q9NPJ3 140 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 MEPEQ9NQ76 525 aaPredicted RBP7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 MED17Q9NVC6 651 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 IL20Q9NYY1 176 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 KLRF1Q9NZS2 232 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 IL20RAQ9UHF4 553 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 PCDHGB1Q9Y5G3 927 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 HS3ST3B1Q9Y662 390 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 WDFY4Q6ZS81 3184 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 MYO15AQ9UKN7 3530 aa7.38□□□□□ -1.23
PDZRN3-212ENST00000498048 NSG1A0A0A6YYJ2 146 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 IRGMA1A4Y4 181 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 C17orf51A8MQB3 221 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 VGLL3A8MV65 326 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 KDM4EB2RXH2 506 aaPredicted RBP7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 H3BSA7 217 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 ZNF701M0R085 212 aaPredicted RBP7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 MYL12BO14950 172 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 PRODHO43272 600 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 TLX2O43763 284 aaPredicted RBP7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 FADS1O60427 444 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 OR7A10O76100 309 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 INMTO95050 263 aa7.37□□□□□ -1.23
PDZRN3-212ENST00000498048 PPP1R3DO95685 299 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms