RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 TIGARQ9NQ88 270 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 RASSF1Q9NS23 344 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 NDRG3Q9UGV2 375 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 PROCRQ9UNN8 238 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 EMC9Q9Y3B6 208 aa13.75□□□□□ -0.21
NUP50-219ENST00000497960 A0A0J9YW62 118 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 CASKO14936 926 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 KIAA0513O60268 411 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 UGT2B17O75795 530 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 CSTAP01040 98 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 PRKCAP17252 672 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 IL11P20809 199 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 SFTPDP35247 375 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 SLC6A8P48029 635 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 CTBP2P56545 445 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 CARD18P57730 90 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 QPRTQ15274 297 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 TOMM34Q15785 309 aaPredicted RBP13.74□□□□□ -0.21
NUP50-219ENST00000497960 SYPL1Q16563 259 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 RABL3Q5HYI8 236 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 GTF2IRD2BQ6EKJ0 949 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 TYW3Q6IPR3 259 aaKnown RBP13.74□□□□□ -0.21
NUP50-219ENST00000497960 NANOGP8Q6NSW7 305 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 FAM214BQ7L5A3 538 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 OLIG3Q7RTU3 272 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 GTF2IRD2Q86UP8 949 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 ZNF619Q8N2I2 560 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 ANKFN1Q8N957 763 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 REXO5Q96IC2 774 aaKnown RBP13.74□□□□□ -0.21
NUP50-219ENST00000497960 GMPPAQ96IJ6 420 aaPredicted RBP13.74□□□□□ -0.21
NUP50-219ENST00000497960 OPN3Q9H1Y3 402 aaPredicted RBP13.74□□□□□ -0.21
NUP50-219ENST00000497960 NANOGQ9H9S0 305 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 GLRX2Q9NS18 164 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 ELOVL5Q9NYP7 299 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 KCNE5Q9UJ90 142 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 EDARQ9UNE0 448 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 LIPT1Q9Y234 373 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 GMEB1Q9Y692 573 aa13.74□□□□□ -0.21
NUP50-219ENST00000497960 HEATR5AQ86XA9 2040 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 FAM221AA4D161 298 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 SH3D21A4FU49 640 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 C5orf58C9J3I9 102 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 GOSR1O95249 250 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 H6PDO95479 791 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 CHRM4P08173 479 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 NUDT7P0C024 238 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 PABPC4LP0CB38 370 aaKnown RBP13.73□□□□□ -0.21
NUP50-219ENST00000497960 UBTFL6P0CB48 400 aaPredicted RBP13.73□□□□□ -0.21
NUP50-219ENST00000497960 CD8BP10966 210 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 GPX2P18283 190 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 CD79BP40259 229 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 KCNJ5P48544 419 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 PCYT1AP49585 367 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 CRISP3P54108 245 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 SELENBP1Q13228 472 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 SKP2Q13309 424 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 GNA13Q14344 377 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 TMEM176BQ3YBM2 270 aaPredicted RBP13.73□□□□□ -0.21
NUP50-219ENST00000497960 HACD2Q6Y1H2 254 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 FRRS1Q6ZNA5 592 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 ATP6V1C2Q8NEY4 427 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 NFKBIDQ8NI38 313 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 MAL2Q969L2 176 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 TMEM19Q96HH6 336 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 TRNT1Q96Q11 434 aaKnown RBP13.73□□□□□ -0.21
NUP50-219ENST00000497960 SAP130Q9H0E3 1048 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 CACYBPQ9HB71 228 aaKnown RBP13.73□□□□□ -0.21
NUP50-219ENST00000497960 A4GALTQ9NPC4 353 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 CALML5Q9NZT1 146 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 SLC35A3Q9Y2D2 325 aa13.73□□□□□ -0.21
NUP50-219ENST00000497960 PDZD2O15018 2839 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 CENPVL1A0A0U1RR11 272 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 PRAMEF27A3QJZ7 478 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 CGAP01215 116 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 ARAFP10398 606 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 BMP2P12643 396 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 POU2F1P14859 743 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 PGCP20142 388 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 CALB2P22676 271 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 SHC1P29353 583 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 SLC7A1P30825 629 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 MNAT1P51948 309 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 CHRNEQ04844 493 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 FAM27E3Q08E93 113 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 SCARB2Q14108 478 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 GUSBP1Q15486 140 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 MAPK14Q16539 360 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 SLC25A53Q5H9E4 307 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 RPS26P11Q5JNZ5 115 aaPredicted RBP13.72□□□□□ -0.21
NUP50-219ENST00000497960 AP1ARQ63HQ0 302 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 ZNF474Q6S9Z5 364 aaPredicted RBP13.72□□□□□ -0.21
NUP50-219ENST00000497960 LRRC74BQ6ZQY2 392 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 C10orf111Q8N326 155 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 OR6K3Q8NGY3 331 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 OR10A6Q8NH74 314 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 TMEM234Q8WY98 164 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 ST8SIA1Q92185 356 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 CPNE4Q96A23 557 aaPredicted RBP13.72□□□□□ -0.21
NUP50-219ENST00000497960 NSL1Q96IY1 281 aa13.72□□□□□ -0.21
NUP50-219ENST00000497960 HOPXQ9BPY8 73 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms