RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ZNF230Q9UIE0 474 aaPredicted RBP12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 PLAGL1Q9UM63 463 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 GPR55Q9Y2T6 319 aaPredicted RBP12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 SULT1B1O43704 296 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 POP7O75817 140 aaKnown RBP12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 ASGR1P07306 291 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 NOS3P29474 1203 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 SERPINA4P29622 427 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 RORAP35398 523 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 PSMB10P40306 273 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 NPBWR1P48145 328 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 TAF13Q15543 124 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 YOD1Q5VVQ6 348 aaPredicted RBP12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 UNQ6126/PRO20091Q6UXV3 157 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 ADCK2Q7Z695 626 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 TPRA1Q86W33 373 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 SLC44A3Q8N4M1 653 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 PHOSPHO1Q8TCT1 267 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 PAQR8Q8TEZ7 354 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 GLYATL2Q8WU03 294 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 TMEM255BQ8WV15 326 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 IER2Q9BTL4 223 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 FKRPQ9H9S5 495 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 CACYBPQ9HB71 228 aaKnown RBP12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 DNAH14Q0VDD8 3507 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 OR14I1A6ND48 311 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 COCHO43405 550 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 RNGTTO60942 597 aaKnown RBP12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 PRKRAO75569 313 aaKnown RBP12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 STC2O76061 302 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 IGHA1P01876 353 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 MPC1LP0DKB6 136 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 BDKRB2P30411 391 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 PTH2RP49190 550 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 ANXA11P50995 505 aaKnown RBP12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 RGS8P57771 180 aaPredicted RBP12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 ZNF311Q5JNZ3 666 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 TMEM71Q6P5X7 295 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 MUC20Q8N307 709 aaPredicted RBP12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 PNPLA2Q96AD5 504 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 C3orf49Q96BT1 292 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 TMEM169Q96HH4 297 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 DPH1Q9BZG8 443 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 FBXL4Q9UKA2 621 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 FBXL3Q9UKT7 428 aa12.13□□□□□ -0.47
GAPVD1-220ENST00000497580 PQLC2LA1A4F0 135 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 LCMT2O60294 686 aaKnown RBP12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 FADS1O60427 444 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 SLC25A12O75746 678 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 LY86O95711 162 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 OR1D2P34982 312 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 SNTB1Q13884 538 aaKnown RBP12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 TRAM2Q15035 370 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 PRPF38BQ5VTL8 546 aaKnown RBP12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 NDUFAF7Q7L592 441 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 ARL14Q8N4G2 192 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 OR2AK2Q8NG84 335 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 SEC22AQ96IW7 307 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 SLC25A32Q9H2D1 315 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 ACSS1Q9NUB1 689 aaPredicted RBP12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 LRFN2Q9ULH4 789 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 CARNS1A5YM72 827 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 OR6C65A6NJZ3 312 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 C8orf89P0DMQ9 161 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 NAA10P41227 235 aaPredicted RBP12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 DHODHQ02127 395 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 RAB33AQ14088 237 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 PCGF3Q3KNV8 242 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 RSPO2Q6UXX9 243 aaPredicted RBP12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 OR2W3Q7Z3T1 314 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 PPP1R16AQ96I34 528 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 TRMT61BQ9BVS5 477 aaKnown RBP12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 FN3KQ9H479 309 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 TMEM218A2RU14 115 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 F5H0A9 414 aaPredicted RBP12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 KCNAB3O43448 404 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 CHRM4P08173 479 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 NDUFV2P19404 249 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 PDE7AQ13946 482 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 PLEKHS1Q5SXH7 462 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 LRRTM1Q86UE6 522 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 BEST3Q8N1M1 668 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 DNAAF1Q8NEP3 725 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 SYNPRQ8TBG9 265 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 ZNF480Q8WV37 535 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 ZCCHC2Q9C0B9 1178 aaKnown RBP12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 WDR13Q9H1Z4 485 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 EXO5Q9H790 373 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 ABRACLQ9P1F3 81 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 ACAD8Q9UKU7 415 aa12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 RPH3AQ9Y2J0 694 aaPredicted RBP12.12□□□□□ -0.47
GAPVD1-220ENST00000497580 PLXNB2O15031 1838 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 CCSO14618 274 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 ADAM12O43184 909 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 CLDN2P57739 230 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 RAB5BP61020 215 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 SMAD3P84022 425 aaKnown RBP12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 GPNMBQ14956 572 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 FAM110CQ1W6H9 321 aa12.11□□□□□ -0.47
GAPVD1-220ENST00000497580 RFLNBQ8N5W9 214 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms