RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ZNF670Q9BS34 389 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 SLC35A5Q9BS91 424 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 SPATA16Q9BXB7 569 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 OR51J1Q9H342 316 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 SLC17A5Q9NRA2 495 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 NUDT15Q9NV35 164 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 LCMT1Q9UIC8 334 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 RPH3ALQ9UNE2 315 aa3.31□□□□□ -1.88
VPS36-206ENST00000497149 MRPS33Q9Y291 106 aaKnown RBP3.31□□□□□ -1.88
VPS36-206ENST00000497149 FRMPD3Q5JV73 1810 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 THSD7BQ9C0I4 1608 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 K7EQM0 130 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 TAPBPO15533 448 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 EMC8O43402 210 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 MMP23AO75900 390 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 ACTL6AO96019 429 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 ALOX5P09917 674 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 GABRR1P24046 479 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 GNB2P62879 340 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 ORC2Q13416 577 aaPredicted RBP3.3□□□□□ -1.88
VPS36-206ENST00000497149 MESDQ14696 234 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 IL17AQ16552 155 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 TRIM16LQ309B1 348 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 SLC25A52Q3SY17 297 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 GALNT17Q6IS24 598 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 FAM220AQ7Z4H9 259 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 ZNF683Q8IZ20 524 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 Q8N7P7 452 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 OR4D9Q8NGE8 314 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 OR4D5Q8NGN0 318 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 OR56B4Q8NH76 319 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 OR1F12Q8NHA8 337 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 TRMT10AQ8TBZ6 339 aaKnown RBP3.3□□□□□ -1.88
VPS36-206ENST00000497149 C7orf33Q8WU49 177 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 RLN3Q8WXF3 142 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 OR1E3Q8WZA6 343 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 MRPS31Q92665 395 aaKnown RBP3.3□□□□□ -1.88
VPS36-206ENST00000497149 IMMP1LQ96LU5 166 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 ZNF607Q96SK3 696 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 NIPSNAP3BQ9BS92 247 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 TUBGCP2Q9BSJ2 902 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 POLR1EQ9GZS1 481 aaKnown RBP3.3□□□□□ -1.88
VPS36-206ENST00000497149 ZDHHC11Q9H8X9 412 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 AATFQ9NY61 560 aaKnown RBP eCLIP3.3□□□□□ -1.88
VPS36-206ENST00000497149 ANAPC11Q9NYG5 84 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 IL36GQ9NZH8 169 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 PCSK1NQ9UHG2 260 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 PHF11Q9UIL8 331 aa3.3□□□□□ -1.88
VPS36-206ENST00000497149 MRPS7Q9Y2R9 242 aaKnown RBP3.3□□□□□ -1.88
VPS36-206ENST00000497149 AK6Q9Y3D8 172 aaKnown RBP3.3□□□□□ -1.88
VPS36-206ENST00000497149 ATRXP46100 2492 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 A0A0G2JRQ6 117 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 LRP5LA4QPB2 252 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 VSTM2BA6NLU5 285 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 BBOX1O75936 387 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 IGLV1-47P01700 117 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 MMP11P24347 488 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 FGF9P31371 208 aaPredicted RBP3.29□□□□□ -1.88
VPS36-206ENST00000497149 YWHABP31946 246 aaKnown RBP3.29□□□□□ -1.88
VPS36-206ENST00000497149 LEPP41159 167 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 TDO2P48775 406 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 DAP3P51398 398 aaKnown RBP3.29□□□□□ -1.88
VPS36-206ENST00000497149 RIPK4P57078 832 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 HERPUD1Q15011 391 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 C10orf120Q5SQS8 335 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 ACOT7LQ6ZUV0 252 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 VRK2Q86Y07 508 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 CLEC4FQ8N1N0 589 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 ATP6V0D2Q8N8Y2 350 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 ZNF540Q8NDQ6 660 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 CATSPER1Q8NEC5 780 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 PGLYRP4Q96LB8 373 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 TGM7Q96PF1 710 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 CCNL2Q96S94 520 aaPredicted RBP3.29□□□□□ -1.88
VPS36-206ENST00000497149 ARHGDIGQ99819 225 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 KLHDC3Q9BQ90 382 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 MAGT1Q9H0U3 335 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 NYAP2Q9P242 653 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 IFT52Q9Y366 437 aa3.29□□□□□ -1.88
VPS36-206ENST00000497149 TTC21BQ7Z4L5 1316 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 A0A0J9YXY3 114 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 PRRG1O14668 218 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 MAGEB3O15480 346 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 CXCL13O43927 109 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 OR10H3O60404 316 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 N4BP1O75113 896 aaKnown RBP3.28□□□□□ -1.88
VPS36-206ENST00000497149 HMMRO75330 724 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 SNAPINO95295 136 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 PNMTP11086 282 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 FUT3P21217 361 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 LAP3P28838 519 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 DRD3P35462 400 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 RBMXP38159 391 aaKnown RBP3.28□□□□□ -1.88
VPS36-206ENST00000497149 IFNAR2P48551 515 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 BIDP55957 195 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 ARL6IP1Q15041 203 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 TPGS2Q68CL5 300 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 TMEM225Q6GV28 225 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 IL34Q6ZMJ4 242 aa3.28□□□□□ -1.88
VPS36-206ENST00000497149 CCDC71LQ8N9Z2 235 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms