RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 GDAP2Q9NXN4 497 aa3.55□□□□□ -1.84
MDM2-220ENST00000496959 TMEM9Q9P0T7 183 aa3.55□□□□□ -1.84
MDM2-220ENST00000496959 GCNT4Q9P109 453 aa3.55□□□□□ -1.84
MDM2-220ENST00000496959 DEC1Q9P2X7 70 aa3.55□□□□□ -1.84
MDM2-220ENST00000496959 LSM7Q9UK45 103 aaKnown RBP3.55□□□□□ -1.84
MDM2-220ENST00000496959 MRTO4Q9UKD2 239 aaKnown RBP3.55□□□□□ -1.84
MDM2-220ENST00000496959 CDH9Q9ULB4 789 aa3.55□□□□□ -1.84
MDM2-220ENST00000496959 CCL26Q9Y258 94 aa3.55□□□□□ -1.84
MDM2-220ENST00000496959 TMEM131Q92545 1883 aa3.55□□□□□ -1.84
MDM2-220ENST00000496959 MUC22E2RYF6 1773 aaPredicted RBP3.55□□□□□ -1.84
MDM2-220ENST00000496959 IGHV1OR15-9A0A0B4J2B8 117 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 C13orf42A0A1B0GVH6 325 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 J3QKU1 62 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 SGK1O00141 431 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 FAM189A1O60320 539 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 NME6O75414 186 aaPredicted RBP3.54□□□□□ -1.84
MDM2-220ENST00000496959 ACTL6AO96019 429 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 TNNC2P02585 160 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 FCER2P06734 321 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 GAP43P17677 238 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 NMT1P30419 496 aaKnown RBP3.54□□□□□ -1.84
MDM2-220ENST00000496959 TNFSF10P50591 281 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 ZNF131P52739 623 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 RBP5P82980 135 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 ILKQ13418 452 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 CD164L2Q6UWJ8 174 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 IGFL2Q6UWQ7 119 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 NHLRC1Q6VVB1 395 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 FAM47EQ6ZV65 393 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 TMEM126BQ8IUX1 230 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 DAW1Q8N136 415 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 NUP93Q8N1F7 819 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 PDCL2Q8N4E4 241 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 ZNF557Q8N988 423 aaPredicted RBP3.54□□□□□ -1.84
MDM2-220ENST00000496959 SETD7Q8WTS6 366 aaKnown RBP3.54□□□□□ -1.84
MDM2-220ENST00000496959 ANKRD36BP1Q96IX9 119 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 KIR2DL4Q99706 377 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 GABRG3Q99928 467 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 NUP58Q9BVL2 599 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 NACA2Q9H009 215 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 DNAJC11Q9NVH1 559 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 FRYLO94915 3013 aa3.54□□□□□ -1.84
MDM2-220ENST00000496959 NYNRINQ9P2P1 1898 aaKnown RBP3.54□□□□□ -1.84
MDM2-220ENST00000496959 SPTA1P02549 2419 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 KNL1Q8NG31 2342 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 FLNBO75369 2602 aaKnown RBP3.53□□□□□ -1.84
MDM2-220ENST00000496959 HELZ2Q9BYK8 2649 aaKnown RBP3.53□□□□□ -1.84
MDM2-220ENST00000496959 TMEM129A0AVI4 362 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 E9PMD0 336 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 CACNG3O60359 315 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 CTDNEP1O95476 244 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 OAS1P00973 400 aaKnown RBP3.53□□□□□ -1.84
MDM2-220ENST00000496959 IGLV3-19P01714 112 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 ZNF32P17041 273 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 GABRG2P18507 467 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 CYP2F1P24903 491 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 U2AF2P26368 475 aaKnown RBP eCLIP3.53□□□□□ -1.844e-10■■□□□ 13
MDM2-220ENST00000496959 STIP1P31948 543 aaKnown RBP3.53□□□□□ -1.84
MDM2-220ENST00000496959 TNFSF9P41273 254 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 XCR1P46094 333 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 ST8SIA6P61647 398 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 TNNC1P63316 161 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 TFAMQ00059 246 aaKnown RBP3.53□□□□□ -1.84
MDM2-220ENST00000496959 GTF2BQ00403 316 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 KDSRQ06136 332 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 SPAG1Q07617 926 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 MPPE1Q53F39 396 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 ZNF789Q5FWF6 425 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 MS4A13Q5J8X5 152 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 HECTD3Q5T447 861 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 SLC22A10Q63ZE4 541 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 STEAP1BQ6NZ63 245 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 LINC00518Q8N0U6 118 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 RELL2Q8NC24 303 aaPredicted RBP3.53□□□□□ -1.84
MDM2-220ENST00000496959 OR6M1Q8NGM8 313 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 UBTD2Q8WUN7 234 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 RLN3Q8WXF3 142 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 HAS2Q92819 552 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 CXorf58Q96LI9 332 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 C9orf85Q96MD7 179 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 ACCSQ96QU6 501 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 PANX3Q96QZ0 392 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 PKMYT1Q99640 499 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 FAM173AQ9BQD7 235 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 SLC26A1Q9H2B4 701 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 TNMDQ9H2S6 317 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 FBXO44Q9H4M3 255 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 CLMPQ9H6B4 373 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 DMAP1Q9NPF5 467 aaPredicted RBP3.53□□□□□ -1.84
MDM2-220ENST00000496959 DNAJC17Q9NVM6 304 aaKnown RBP3.53□□□□□ -1.84
MDM2-220ENST00000496959 RBAKQ9NYW8 714 aaPredicted RBP3.53□□□□□ -1.84
MDM2-220ENST00000496959 DPM3Q9P2X0 92 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 EMCNQ9ULC0 261 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 ZFHX4Q86UP3 3567 aa3.53□□□□□ -1.84
MDM2-220ENST00000496959 NAV2Q8IVL1 2488 aa3.52□□□□□ -1.85
MDM2-220ENST00000496959 A0A0A6YYD4 124 aa3.52□□□□□ -1.85
MDM2-220ENST00000496959 YJEFN3A6XGL0 299 aa3.52□□□□□ -1.85
MDM2-220ENST00000496959 TTI1O43156 1089 aa3.52□□□□□ -1.85
MDM2-220ENST00000496959 TIMM44O43615 452 aa3.52□□□□□ -1.85
MDM2-220ENST00000496959 IGKV3-11P04433 115 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms