RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 MTF2Q9Y483 593 aaPredicted RBP3.2□□□□□ -1.9
TRIM4-205ENST00000496896 CCL27Q9Y4X3 112 aa3.2□□□□□ -1.9
TRIM4-205ENST00000496896 CITO14578 2027 aa3.2□□□□□ -1.9
TRIM4-205ENST00000496896 PRRC2AP48634 2157 aaKnown RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 DICER1Q9UPY3 1922 aaKnown RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 TRAV18A0A075B6X5 111 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 A0A0J9YVX5 310 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 URADA6NGE7 173 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 GLTPD2A6NH11 291 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 MEI4A8MW99 385 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 NPIPA3F8WFD2 350 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 K7EQG2 157 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 PDHXO00330 501 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 AIM2O14862 343 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 INPP4BO15327 924 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ZBTB14O43829 449 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 UGT1A9O60656 530 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ZNF354AO60765 605 aaPredicted RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 MRPS14O60783 128 aaKnown RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 PDE5AO76074 875 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 SRP72O76094 671 aaKnown RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 VAPBO95292 243 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 C9P02748 559 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ADORA3P0DMS8 318 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 CXCL8P10145 99 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 STMN1P16949 149 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 XRCC1P18887 633 aaPredicted RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 CYP2B6P20813 491 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 FASP25445 335 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 DCKP27707 260 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 FCGR2BP31994 310 aaPredicted RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 FCGR2CP31995 323 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 CD151P48509 253 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 KHKP50053 298 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 RIDAP52758 137 aaKnown RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 TMBIM6P55061 237 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 RAB10P61026 200 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 PSME3P61289 254 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ATP6V0D1P61421 351 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 MRPS22P82650 360 aaKnown RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 MYBPC1Q00872 1141 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 GBE1Q04446 702 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 BTG3Q14201 252 aaPredicted RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 MOGQ16653 247 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 CDO1Q16878 200 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 MFSD4BQ5TF39 518 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 LPCAT4Q643R3 524 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 KCTD11Q693B1 232 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 LCN8Q6JVE9 175 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 PMF1Q6P1K2 205 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ABRAXAS1Q6UWZ7 409 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ZCCHC23Q6ZST2 131 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ERN2Q76MJ5 926 aaKnown RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 LPCAT2Q7L5N7 544 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 COX8CQ7Z4L0 72 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ABI3BPQ7Z7G0 1075 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 DHFR2Q86XF0 187 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 TBC1D21Q8IYX1 336 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ZNF567Q8N184 647 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ZNF781Q8N8C0 355 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 DNAAF3Q8N9W5 541 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 OR2T34Q8NGX1 318 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 OR2T3Q8NH03 318 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 RNF139Q8WU17 664 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 RAB2BQ8WUD1 216 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 SEPT8Q92599 483 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 C18orf25Q96B23 403 aaPredicted RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 CENPNQ96H22 339 aaPredicted RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 CYYR1Q96J86 154 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 VPS39Q96JC1 886 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 CNBD2Q96M20 576 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 RANBP9Q96S59 729 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 STRADBQ9C0K7 418 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 TRPV6Q9H1D0 765 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 C10orf88Q9H8K7 445 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 UGT1A7Q9HAW7 530 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 UGT1A10Q9HAW8 530 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 UGT1A8Q9HAW9 530 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 POPDC3Q9HBV1 291 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ANKHQ9HCJ1 492 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 IL1RAPQ9NPH3 570 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 PHPT1Q9NRX4 125 aaPredicted RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ACTR3BQ9P1U1 418 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 C5AR2Q9P296 337 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 ABCD2Q9UBJ2 740 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 CD300AQ9UGN4 299 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 BLOC1S6Q9UL45 172 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 UBQLN1Q9UMX0 589 aaKnown RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 SNX7Q9UNH6 387 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 COLEC10Q9Y6Z7 277 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 COL4A4P53420 1690 aaPredicted RBP3.19□□□□□ -1.9
TRIM4-205ENST00000496896 BRWD3Q6RI45 1802 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 WDR90Q96KV7 1748 aa3.19□□□□□ -1.9
TRIM4-205ENST00000496896 TRIP11Q15643 1979 aa3.18□□□□□ -1.9
TRIM4-205ENST00000496896 PDCD11Q14690 1871 aaKnown RBP3.18□□□□□ -1.9
TRIM4-205ENST00000496896 A0A087WV48 116 aa3.18□□□□□ -1.9
TRIM4-205ENST00000496896 IGHV3-16A0A0C4DH30 117 aa3.18□□□□□ -1.9
TRIM4-205ENST00000496896 LOC100653049A0A140TA62 436 aa3.18□□□□□ -1.9
TRIM4-205ENST00000496896 DHRS12A0PJE2 317 aa3.18□□□□□ -1.9
TRIM4-205ENST00000496896 PSMD12O00232 456 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms