RNA–Protein interactions for RNA: ENST00000496805.5

PEF1-208, Transcript of penta-EF-hand domain containing 1, humanhuman

TSL 5

Gene PEF1, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-208ENST00000496805 A4GNTQ9UNA3 340 aa11.74□□□□□ -0.53
PEF1-208ENST00000496805 YARS2Q9Y2Z4 477 aaKnown RBP11.74□□□□□ -0.53
PEF1-208ENST00000496805 J3KTA2 159 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 TNFRSF11BO00300 401 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 EI24O14681 340 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 FFAR1O14842 300 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 FRS3O43559 492 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 ITGA10O75578 1167 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 GADD45GO95257 159 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 ITGAMP11215 1152 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 ZNF26P17031 533 aaPredicted RBP11.73□□□□□ -0.53
PEF1-208ENST00000496805 LIMS1P48059 325 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 CLK3P49761 638 aaKnown RBP11.73□□□□□ -0.53
PEF1-208ENST00000496805 SSR4P51571 173 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 ALDH3A2P51648 485 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 MLF1P58340 268 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 TAS2R41P59536 307 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 RPP38P78345 283 aaKnown RBP11.73□□□□□ -0.53
PEF1-208ENST00000496805 AIMP2Q13155 320 aaKnown RBP11.73□□□□□ -0.53
PEF1-208ENST00000496805 SKP2Q13309 424 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 NTRK2Q16620 822 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 PPP4R4Q6NUP7 873 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 ZNF613Q6PF04 617 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 LYPD8Q6UX82 237 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 NUP54Q7Z3B4 507 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 STK32CQ86UX6 486 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 TMEM200AQ86VY9 491 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 RBM45Q8IUH3 476 aaKnown RBP11.73□□□□□ -0.53
PEF1-208ENST00000496805 CNOT9Q92600 299 aaKnown RBP11.73□□□□□ -0.53
PEF1-208ENST00000496805 HGDQ93099 445 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 RDH12Q96NR8 316 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 MCHR1Q99705 422 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 RBM4BQ9BQ04 359 aaKnown RBP11.73□□□□□ -0.53
PEF1-208ENST00000496805 PSD2Q9BQI7 771 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 FNDC11Q9BVV2 318 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 RBM4Q9BWF3 364 aaKnown RBP11.73□□□□□ -0.53
PEF1-208ENST00000496805 TRIM2Q9C040 744 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 NMNAT1Q9HAN9 279 aaPredicted RBP11.73□□□□□ -0.53
PEF1-208ENST00000496805 FLRT3Q9NZU0 649 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 KIF17Q9P2E2 1029 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 TEKT2Q9UIF3 430 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 PRDM4Q9UKN5 801 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 U3KQV3 271 aa11.73□□□□□ -0.53
PEF1-208ENST00000496805 TRAPPC13A5PLN9 417 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 FAAHO00519 579 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 SOCS2O14508 198 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 TP53I11O14683 189 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 ZNF264O43296 627 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 FADS1O60427 444 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 EIF4E2O60573 245 aaKnown RBP11.72□□□□□ -0.53
PEF1-208ENST00000496805 BCAS1O75363 584 aaPredicted RBP11.72□□□□□ -0.53
PEF1-208ENST00000496805 ALPLP05186 524 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 UBTFL6P0CB48 400 aaPredicted RBP11.72□□□□□ -0.53
PEF1-208ENST00000496805 AGAP20933 346 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 YAP1P46937 504 aaKnown RBP11.72□□□□□ -0.53
PEF1-208ENST00000496805 SLC6A8P48029 635 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 HMGA2P52926 109 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 AQP4P55087 323 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 FBXW4P57775 412 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 PPP2R2BQ00005 443 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 GANABQ14697 944 aaKnown RBP11.72□□□□□ -0.53
PEF1-208ENST00000496805 TRAM2Q15035 370 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 CD226Q15762 336 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 FGD3Q5JSP0 725 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 SWT1Q5T5J6 900 aaKnown RBP11.72□□□□□ -0.53
PEF1-208ENST00000496805 H3F3CQ6NXT2 135 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 TMEM81Q6P7N7 255 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 C16orf47Q6ZP98 133 aaPredicted RBP11.72□□□□□ -0.53
PEF1-208ENST00000496805 LINC00696Q6ZRV3 163 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 RPS19BP1Q86WX3 136 aaKnown RBP11.72□□□□□ -0.53
PEF1-208ENST00000496805 GPALPP1Q8IXQ4 340 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 LINC00471Q8N535 108 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 TMCO5AQ8N6Q1 288 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 ASB15Q8WXK1 588 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 DNAJC9Q8WXX5 260 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 ARSGQ96EG1 525 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 ZNF597Q96LX8 424 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 SECISBP2Q96T21 854 aaKnown RBP11.72□□□□□ -0.53
PEF1-208ENST00000496805 WFDC6Q9BQY6 131 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 COQ10BQ9H8M1 238 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 LIN28AQ9H9Z2 209 aaKnown RBP11.72□□□□□ -0.53
PEF1-208ENST00000496805 ATP13A2Q9NQ11 1180 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 ACER3Q9NUN7 267 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 TMCC3Q9ULS5 477 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 ORC6Q9Y5N6 252 aa11.72□□□□□ -0.53
PEF1-208ENST00000496805 CPSF4LA6NMK7 179 aaKnown RBP11.71□□□□□ -0.53
PEF1-208ENST00000496805 PDLIM1O00151 329 aa11.71□□□□□ -0.53
PEF1-208ENST00000496805 GTPBP1O00178 669 aaKnown RBP11.71□□□□□ -0.53
PEF1-208ENST00000496805 NDUFB5O43674 189 aa11.71□□□□□ -0.53
PEF1-208ENST00000496805 ZNF354AO60765 605 aaPredicted RBP11.71□□□□□ -0.53
PEF1-208ENST00000496805 CCNB2O95067 398 aa11.71□□□□□ -0.53
PEF1-208ENST00000496805 HTR2AP28223 471 aa11.71□□□□□ -0.53
PEF1-208ENST00000496805 SOX3P41225 446 aa11.71□□□□□ -0.53
PEF1-208ENST00000496805 RNF144AP50876 292 aaPredicted RBP11.71□□□□□ -0.53
PEF1-208ENST00000496805 SUMO3P55854 103 aaPredicted RBP11.71□□□□□ -0.53
PEF1-208ENST00000496805 ST3GAL3Q11203 375 aa11.71□□□□□ -0.53
PEF1-208ENST00000496805 EPS8Q12929 822 aa11.71□□□□□ -0.53
PEF1-208ENST00000496805 PIN1Q13526 163 aaPredicted RBP11.71□□□□□ -0.53
PEF1-208ENST00000496805 EXOC3L2Q2M3D2 409 aa11.71□□□□□ -0.53
PEF1-208ENST00000496805 RFX4Q33E94 735 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms