RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 RINLQ6ZS11 566 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 CHMP1BQ7LBR1 199 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 TRPM8Q7Z2W7 1104 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 GRINAQ7Z429 371 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 LACC1Q8IV20 430 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 PGAM4Q8N0Y7 254 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 C9orf106Q8NAJ2 232 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 OR10D3Q8NH80 312 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 ITLN2Q8WWU7 325 aaPredicted RBP17.47■□□□□ 0.39
HDAC4-212ENST00000495497 FIG4Q92562 907 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 RND1Q92730 232 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 DNAJA3Q96EY1 480 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 KLHL15Q96M94 604 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 KCTD14Q9BQ13 255 aaPredicted RBP17.47■□□□□ 0.39
HDAC4-212ENST00000495497 CALHM2Q9HA72 323 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 CLCF1Q9UBD9 225 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 STOML1Q9UBI4 398 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 Q9UFV3 132 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 OSGIN1Q9UJX0 560 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 SLC13A4Q9UKG4 626 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 RNF6Q9Y252 685 aa17.47■□□□□ 0.39
HDAC4-212ENST00000495497 TMED7-TICAM2A0A0A6YYA0 188 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 A0A1W2PNR3 127 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 TMEM72A0PK05 275 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 CD8B2A6NJW9 211 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 M0R3H8 397 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 GSTA4O15217 222 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 CXCL13O43927 109 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 TPST2O60704 377 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 TGM6O95932 706 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 LGI1O95970 557 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 NCK1P16333 377 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 HTR2AP28223 471 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 KDELR2P33947 212 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 APOBEC1P41238 236 aaKnown RBP17.46■□□□□ 0.39
HDAC4-212ENST00000495497 RPS3AP61247 264 aaKnown RBP17.46■□□□□ 0.39
HDAC4-212ENST00000495497 COPZ1P61923 177 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 SF3B4Q15427 424 aaKnown RBP eCLIP17.46■□□□□ 0.39
HDAC4-212ENST00000495497 SGCBQ16585 318 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 HBMQ6B0K9 141 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 WBP2NLQ6ICG8 309 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 PPP4R4Q6NUP7 873 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 RBM45Q8IUH3 476 aaKnown RBP17.46■□□□□ 0.39
HDAC4-212ENST00000495497 DEFB107AQ8IZN7 70 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 NAXEQ8NCW5 288 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 FAM156AQ8NDB6 213 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 BHLHE22Q8NFJ8 381 aaPredicted RBP17.46■□□□□ 0.39
HDAC4-212ENST00000495497 OR4D11Q8NGI4 311 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 OR2V1Q8NHB1 315 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 VANGL1Q8TAA9 524 aaPredicted RBP17.46■□□□□ 0.39
HDAC4-212ENST00000495497 SDCCAG3Q96C92 435 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 CDRT15Q96T59 188 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 ARHGDIGQ99819 225 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 ADAM19Q9H013 955 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 SERINC1Q9NRX5 453 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 KLHL28Q9NXS3 571 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 TMED7Q9Y3B3 224 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 KIAA1549Q9HCM3 1950 aa17.46■□□□□ 0.39
HDAC4-212ENST00000495497 TMEM229AB2RXF0 380 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 CXCR6O00574 342 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 ADAMDEC1O15204 470 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 FESP07332 822 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 TNFRSF1BP20333 461 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 CPOXP36551 454 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 POLR2HP52434 150 aaKnown RBP17.45■□□□□ 0.38
HDAC4-212ENST00000495497 SMSP52788 366 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 RGS8P57771 180 aaPredicted RBP17.45■□□□□ 0.38
HDAC4-212ENST00000495497 NRF1Q16656 503 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 C3orf33Q6P1S2 294 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 C16orf89Q6UX73 402 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 ESPNLQ6ZVH7 1005 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 RBM15BQ8NDT2 890 aaKnown RBP17.45■□□□□ 0.38
HDAC4-212ENST00000495497 OSTF1Q92882 214 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 SLC35B4Q969S0 331 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 OR11A1Q9GZK7 315 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 COQ10BQ9H8M1 238 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 CHRNA9Q9UGM1 479 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 EGFL7Q9UHF1 273 aa17.45■□□□□ 0.38
HDAC4-212ENST00000495497 A1L4Q6 167 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 MBD3L4A6NDZ8 208 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-212ENST00000495497 MBD3L3A6NE82 208 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-212ENST00000495497 MBD3L5A6NJ08 208 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-212ENST00000495497 UBOX5O94941 541 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 TFPIP10646 304 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 TCN1P20061 433 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-212ENST00000495497 CALB2P22676 271 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 MSX2P35548 267 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-212ENST00000495497 HTR3AP46098 478 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 MNAT1P51948 309 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 CARD18P57730 90 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 BNIP2Q12982 314 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 PON3Q15166 354 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 NPTX1Q15818 432 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 CYBRD1Q53TN4 286 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 RIPPLY2Q5TAB7 128 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 P4HA3Q7Z4N8 544 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 OR52E4Q8NGH9 312 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 OR6T1Q8NGN1 323 aa17.44■□□□□ 0.38
HDAC4-212ENST00000495497 MBD3L2Q8NHZ7 208 aaPredicted RBP17.44■□□□□ 0.38
HDAC4-212ENST00000495497 FNDC9Q8TBE3 224 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms