RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 FAM91A1Q658Y4 838 aa10□□□□□ -0.81
APTX-230ENST00000494649 MRGPRGQ86SM5 289 aa10□□□□□ -0.81
APTX-230ENST00000494649 GRAMD2AQ8IUY3 354 aa10□□□□□ -0.81
APTX-230ENST00000494649 P3H2Q8IVL5 708 aa10□□□□□ -0.81
APTX-230ENST00000494649 C9orf106Q8NAJ2 232 aa10□□□□□ -0.81
APTX-230ENST00000494649 FNDC9Q8TBE3 224 aa10□□□□□ -0.81
APTX-230ENST00000494649 SSC4DQ8WTU2 575 aa10□□□□□ -0.81
APTX-230ENST00000494649 TMEM234Q8WY98 164 aa10□□□□□ -0.81
APTX-230ENST00000494649 PMM1Q92871 262 aa10□□□□□ -0.81
APTX-230ENST00000494649 ARL5BQ96KC2 179 aa10□□□□□ -0.81
APTX-230ENST00000494649 OR5B2Q96R09 309 aa10□□□□□ -0.81
APTX-230ENST00000494649 TMEM181Q9P2C4 612 aa10□□□□□ -0.81
APTX-230ENST00000494649 ABCD2Q9UBJ2 740 aa10□□□□□ -0.81
APTX-230ENST00000494649 OSGIN1Q9UJX0 560 aa10□□□□□ -0.81
APTX-230ENST00000494649 DOPEY2Q9Y3R5 2298 aa10□□□□□ -0.81
APTX-230ENST00000494649 ADGRG4Q8IZF6 3080 aa10□□□□□ -0.81
APTX-230ENST00000494649 A0A0G2JNJ9 132 aa10□□□□□ -0.81
APTX-230ENST00000494649 ZC3H12DA2A288 527 aaKnown RBP10□□□□□ -0.81
APTX-230ENST00000494649 FAM90A27PA6NNH2 459 aa10□□□□□ -0.81
APTX-230ENST00000494649 AHRRA9YTQ3 701 aa10□□□□□ -0.81
APTX-230ENST00000494649 CXCR6O00574 342 aa10□□□□□ -0.81
APTX-230ENST00000494649 DNAJA2O60884 412 aa10□□□□□ -0.81
APTX-230ENST00000494649 PDE5AO76074 875 aa10□□□□□ -0.81
APTX-230ENST00000494649 ZNF682O95780 498 aa10□□□□□ -0.81
APTX-230ENST00000494649 FESP07332 822 aa10□□□□□ -0.81
APTX-230ENST00000494649 GABRA1P14867 456 aa10□□□□□ -0.81
APTX-230ENST00000494649 CD247P20963 164 aa10□□□□□ -0.81
APTX-230ENST00000494649 SLC7A1P30825 629 aa10□□□□□ -0.81
APTX-230ENST00000494649 ZNF136P52737 540 aa10□□□□□ -0.81
APTX-230ENST00000494649 PER3P56645 1201 aa10□□□□□ -0.81
APTX-230ENST00000494649 NCALDP61601 193 aa10□□□□□ -0.81
APTX-230ENST00000494649 RAC1P63000 192 aa10□□□□□ -0.81
APTX-230ENST00000494649 GLYR1Q49A26 553 aaPredicted RBP10□□□□□ -0.81
APTX-230ENST00000494649 HBMQ6B0K9 141 aa10□□□□□ -0.81
APTX-230ENST00000494649 ERICH5Q6P6B1 374 aa10□□□□□ -0.81
APTX-230ENST00000494649 DHRS4L2Q6PKH6 230 aa10□□□□□ -0.81
APTX-230ENST00000494649 ZNF550Q7Z398 422 aa10□□□□□ -0.81
APTX-230ENST00000494649 GRINAQ7Z429 371 aa10□□□□□ -0.81
APTX-230ENST00000494649 VTCN1Q7Z7D3 282 aa10□□□□□ -0.81
APTX-230ENST00000494649 PATL1Q86TB9 770 aaKnown RBP10□□□□□ -0.81
APTX-230ENST00000494649 ADGRG3Q86Y34 549 aa10□□□□□ -0.81
APTX-230ENST00000494649 PGAM4Q8N0Y7 254 aa10□□□□□ -0.81
APTX-230ENST00000494649 OR6T1Q8NGN1 323 aa10□□□□□ -0.81
APTX-230ENST00000494649 ROBO4Q8WZ75 1007 aa10□□□□□ -0.81
APTX-230ENST00000494649 ST8SIA1Q92185 356 aa10□□□□□ -0.81
APTX-230ENST00000494649 KLHL15Q96M94 604 aa10□□□□□ -0.81
APTX-230ENST00000494649 SRXN1Q9BYN0 137 aa10□□□□□ -0.81
APTX-230ENST00000494649 UCK2Q9BZX2 261 aa10□□□□□ -0.81
APTX-230ENST00000494649 PCDHAC1Q9H158 963 aa10□□□□□ -0.81
APTX-230ENST00000494649 ACER3Q9NUN7 267 aa10□□□□□ -0.81
APTX-230ENST00000494649 Q9UFV3 132 aa10□□□□□ -0.81
APTX-230ENST00000494649 CLEC4AQ9UMR7 237 aa10□□□□□ -0.81
APTX-230ENST00000494649 AP4B1Q9Y6B7 739 aa10□□□□□ -0.81
APTX-230ENST00000494649 FLNBO75369 2602 aaKnown RBP10□□□□□ -0.81
APTX-230ENST00000494649 TMED7-TICAM2A0A0A6YYA0 188 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 TMEM72A0PK05 275 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 C7orf72A4D263 438 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 CPSF4LA6NMK7 179 aaKnown RBP9.99□□□□□ -0.81
APTX-230ENST00000494649 AQP8O94778 261 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 SERPINA1P01009 418 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 UQCRBP14927 111 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 CALB2P22676 271 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 KDELR2P33947 212 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 CPOXP36551 454 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 SLC1A3P43003 542 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 KCNJ5P48544 419 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 FOXF2Q12947 444 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 SELENBP1Q13228 472 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 VEZF1Q14119 521 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 CYBRD1Q53TN4 286 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 C3orf33Q6P1S2 294 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 C16orf89Q6UX73 402 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 P4HA3Q7Z4N8 544 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 OR52E4Q8NGH9 312 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 ITLN2Q8WWU7 325 aaPredicted RBP9.99□□□□□ -0.81
APTX-230ENST00000494649 OIT3Q8WWZ8 545 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 RND1Q92730 232 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 FAM162AQ96A26 154 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 INTS12Q96CB8 462 aaKnown RBP9.99□□□□□ -0.81
APTX-230ENST00000494649 CLPTM1LQ96KA5 538 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 HHATLQ9HCP6 504 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 KLHL28Q9NXS3 571 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 CHRNA9Q9UGM1 479 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 RNF6Q9Y252 685 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 TMED7Q9Y3B3 224 aa9.99□□□□□ -0.81
APTX-230ENST00000494649 SLC22A20A6NK97 555 aa9.98□□□□□ -0.81
APTX-230ENST00000494649 LGI1O95970 557 aa9.98□□□□□ -0.81
APTX-230ENST00000494649 BMP5P22003 454 aa9.98□□□□□ -0.81
APTX-230ENST00000494649 ADH6P28332 368 aa9.98□□□□□ -0.81
APTX-230ENST00000494649 YAP1P46937 504 aaKnown RBP9.98□□□□□ -0.81
APTX-230ENST00000494649 EEFSECP57772 596 aaKnown RBP9.98□□□□□ -0.81
APTX-230ENST00000494649 CEACAM7Q14002 265 aa9.98□□□□□ -0.81
APTX-230ENST00000494649 NPTX1Q15818 432 aa9.98□□□□□ -0.81
APTX-230ENST00000494649 SYT14P1Q58G82 188 aa9.98□□□□□ -0.81
APTX-230ENST00000494649 HIST2H2BCQ6DN03 193 aa9.98□□□□□ -0.81
APTX-230ENST00000494649 WBP2NLQ6ICG8 309 aa9.98□□□□□ -0.81
APTX-230ENST00000494649 DEF8Q6ZN54 512 aa9.98□□□□□ -0.81
APTX-230ENST00000494649 TSPYL5Q86VY4 417 aaPredicted RBP9.98□□□□□ -0.81
APTX-230ENST00000494649 LIX1LQ8IVB5 337 aa9.98□□□□□ -0.81
APTX-230ENST00000494649 SLC30A8Q8IWU4 369 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms