RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 RPS4Y1P22090 263 aaKnown RBP29.6■■■□□ 2.33
CBX4-203ENST00000494546 APOBEC1P41238 236 aaKnown RBP29.6■■■□□ 2.33
CBX4-203ENST00000494546 IDH2P48735 452 aaKnown RBP29.6■■■□□ 2.33
CBX4-203ENST00000494546 DSTNP60981 165 aa29.6■■■□□ 2.33
CBX4-203ENST00000494546 MAPK11Q15759 364 aa29.6■■■□□ 2.33
CBX4-203ENST00000494546 SYT14P1Q58G82 188 aa29.6■■■□□ 2.33
CBX4-203ENST00000494546 PAMR1Q6UXH9 720 aa29.6■■■□□ 2.33
CBX4-203ENST00000494546 BEND4Q6ZU67 534 aa29.6■■■□□ 2.33
CBX4-203ENST00000494546 SLC43A2Q8N370 569 aa29.6■■■□□ 2.33
CBX4-203ENST00000494546 GTF2H4Q92759 462 aa29.6■■■□□ 2.33
CBX4-203ENST00000494546 CCDC106Q9BWC9 280 aa29.6■■■□□ 2.33
CBX4-203ENST00000494546 FANCFQ9NPI8 374 aa29.6■■■□□ 2.33
CBX4-203ENST00000494546 AKAP6Q13023 2319 aa29.59■■■□□ 2.33
CBX4-203ENST00000494546 AP3D1O14617 1153 aa29.59■■■□□ 2.33
CBX4-203ENST00000494546 BCHEP06276 602 aa29.59■■■□□ 2.33
CBX4-203ENST00000494546 DBIP07108 87 aaKnown RBP29.59■■■□□ 2.33
CBX4-203ENST00000494546 TFPIP10646 304 aa29.59■■■□□ 2.33
CBX4-203ENST00000494546 CD1EP15812 388 aa29.59■■■□□ 2.33
CBX4-203ENST00000494546 NUFIP2Q7Z417 695 aaKnown RBP29.59■■■□□ 2.33
CBX4-203ENST00000494546 GRINAQ7Z429 371 aa29.59■■■□□ 2.33
CBX4-203ENST00000494546 PEX5LQ8IYB4 626 aa29.59■■■□□ 2.33
CBX4-203ENST00000494546 SLC25A43Q8WUT9 341 aaPredicted RBP29.59■■■□□ 2.33
CBX4-203ENST00000494546 CALML5Q9NZT1 146 aa29.59■■■□□ 2.33
CBX4-203ENST00000494546 CHRNA9Q9UGM1 479 aa29.59■■■□□ 2.33
CBX4-203ENST00000494546 PCDHB14Q9Y5E9 798 aa29.59■■■□□ 2.33
CBX4-203ENST00000494546 SPIN1Q9Y657 262 aaPredicted RBP29.59■■■□□ 2.33
CBX4-203ENST00000494546 A0A1W2PPR1 153 aa29.58■■■□□ 2.33
CBX4-203ENST00000494546 CRYGSP22914 178 aa29.58■■■□□ 2.33
CBX4-203ENST00000494546 MRPL19P49406 292 aaKnown RBP29.58■■■□□ 2.33
CBX4-203ENST00000494546 DIO1P49895 249 aa29.58■■■□□ 2.33
CBX4-203ENST00000494546 MRPL2Q5T653 305 aaKnown RBP29.58■■■□□ 2.33
CBX4-203ENST00000494546 STAC2Q6ZMT1 411 aa29.58■■■□□ 2.33
CBX4-203ENST00000494546 PMM1Q92871 262 aa29.58■■■□□ 2.33
CBX4-203ENST00000494546 PAIP1Q9H074 479 aaKnown RBP29.58■■■□□ 2.33
CBX4-203ENST00000494546 GP6Q9HCN6 339 aa29.58■■■□□ 2.33
CBX4-203ENST00000494546 HRNRQ86YZ3 2850 aaPredicted RBP29.57■■■□□ 2.32
CBX4-203ENST00000494546 DEFB108AA8MXU0 73 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 SULT2B1O00204 365 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 SIAH2O43255 324 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 YES1P07947 543 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 KLK2P20151 261 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 CCNA2P20248 432 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 CRISP3P54108 245 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 TMPPEQ6ZT21 453 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 C22orf34Q6ZV56 151 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 SLC38A5Q8WUX1 472 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 CKAP2Q8WWK9 683 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 PIK3IP1Q96FE7 263 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 FOXC2Q99958 501 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 CCDC167Q9P0B6 97 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 KLHL9Q9P2J3 617 aa29.57■■■□□ 2.32
CBX4-203ENST00000494546 NR5A2O00482 541 aa29.56■■■□□ 2.32
CBX4-203ENST00000494546 SMAD9O15198 467 aaKnown RBP29.56■■■□□ 2.32
CBX4-203ENST00000494546 RAF1P04049 648 aa29.56■■■□□ 2.32
CBX4-203ENST00000494546 TFPTP0C1Z6 253 aa29.56■■■□□ 2.32
CBX4-203ENST00000494546 KEAP1Q14145 624 aa29.56■■■□□ 2.32
CBX4-203ENST00000494546 FUNDC1Q8IVP5 155 aa29.56■■■□□ 2.32
CBX4-203ENST00000494546 OR52P1PQ8NH57 321 aa29.56■■■□□ 2.32
CBX4-203ENST00000494546 DNAJA3Q96EY1 480 aa29.56■■■□□ 2.32
CBX4-203ENST00000494546 MAGEB18Q96M61 343 aa29.56■■■□□ 2.32
CBX4-203ENST00000494546 ABCA4P78363 2273 aa29.55■■■□□ 2.32
CBX4-203ENST00000494546 TMEM247A6NEH6 219 aa29.55■■■□□ 2.32
CBX4-203ENST00000494546 FESP07332 822 aa29.55■■■□□ 2.32
CBX4-203ENST00000494546 CSNK2A1P68400 391 aaPredicted RBP29.55■■■□□ 2.32
CBX4-203ENST00000494546 RASGEF1BQ0VAM2 473 aa29.55■■■□□ 2.32
CBX4-203ENST00000494546 RPS26P11Q5JNZ5 115 aaPredicted RBP29.55■■■□□ 2.32
CBX4-203ENST00000494546 BLOC1S3Q6QNY0 202 aa29.55■■■□□ 2.32
CBX4-203ENST00000494546 TFAP2EQ6VUC0 442 aa29.55■■■□□ 2.32
CBX4-203ENST00000494546 VRK2Q86Y07 508 aa29.55■■■□□ 2.32
CBX4-203ENST00000494546 ADGRG3Q86Y34 549 aa29.55■■■□□ 2.32
CBX4-203ENST00000494546 THOC1Q96FV9 657 aaKnown RBP29.55■■■□□ 2.32
CBX4-203ENST00000494546 PSD2Q9BQI7 771 aa29.55■■■□□ 2.32
CBX4-203ENST00000494546 TACO1Q9BSH4 297 aaKnown RBP29.55■■■□□ 2.32
CBX4-203ENST00000494546 RLIMQ9NVW2 624 aa29.55■■■□□ 2.32
CBX4-203ENST00000494546 THUMPD1Q9NXG2 353 aaKnown RBP29.55■■■□□ 2.32
CBX4-203ENST00000494546 CFAP73A6NFT4 308 aa29.54■■■□□ 2.32
CBX4-203ENST00000494546 CLIC1O00299 241 aa29.54■■■□□ 2.32
CBX4-203ENST00000494546 CYTIPO60759 359 aa29.54■■■□□ 2.32
CBX4-203ENST00000494546 RGNQ15493 299 aa29.54■■■□□ 2.32
CBX4-203ENST00000494546 ZNF836Q6ZNA1 936 aa29.54■■■□□ 2.32
CBX4-203ENST00000494546 SPDL1Q96EA4 605 aa29.54■■■□□ 2.32
CBX4-203ENST00000494546 TMEM19Q96HH6 336 aa29.54■■■□□ 2.32
CBX4-203ENST00000494546 ARL5BQ96KC2 179 aa29.54■■■□□ 2.32
CBX4-203ENST00000494546 OR11A1Q9GZK7 315 aa29.54■■■□□ 2.32
CBX4-203ENST00000494546 RAD21L1Q9H4I0 556 aa29.54■■■□□ 2.32
CBX4-203ENST00000494546 BCO1Q9HAY6 547 aa29.54■■■□□ 2.32
CBX4-203ENST00000494546 ING1Q9UK53 422 aaPredicted RBP29.54■■■□□ 2.32
CBX4-203ENST00000494546 DSPPQ9NZW4 1301 aa29.53■■■□□ 2.32
CBX4-203ENST00000494546 A0A096LPI6 279 aa29.53■■■□□ 2.32
CBX4-203ENST00000494546 SASH3O75995 380 aa29.53■■■□□ 2.32
CBX4-203ENST00000494546 ATE1O95260 518 aa29.53■■■□□ 2.32
CBX4-203ENST00000494546 UQCRBP14927 111 aa29.53■■■□□ 2.32
CBX4-203ENST00000494546 PPP3CBP16298 524 aa29.53■■■□□ 2.32
CBX4-203ENST00000494546 HTR3AP46098 478 aa29.53■■■□□ 2.32
CBX4-203ENST00000494546 EPS8Q12929 822 aa29.53■■■□□ 2.32
CBX4-203ENST00000494546 LIN52Q52LA3 116 aa29.53■■■□□ 2.32
CBX4-203ENST00000494546 CXorf67Q86X51 503 aaPredicted RBP29.53■■■□□ 2.32
CBX4-203ENST00000494546 ZNF775Q96BV0 537 aaPredicted RBP29.53■■■□□ 2.32
CBX4-203ENST00000494546 ACTR6Q9GZN1 396 aa29.53■■■□□ 2.32
CBX4-203ENST00000494546 GPR52Q9Y2T5 361 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms