RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 HOXC5Q00444 222 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 LIPEQ05469 1076 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 KRT72Q14CN4 511 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 SGCBQ16585 318 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 DUSP7Q16829 419 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 POMZP3Q6PJE2 187 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 PATL1Q86TB9 770 aaKnown RBP12.17□□□□□ -0.46
COL1A1-208ENST00000494334 ADGRG3Q86Y34 549 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 NAXEQ8NCW5 288 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 ATP6V1C2Q8NEY4 427 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 BHLHE22Q8NFJ8 381 aaPredicted RBP12.17□□□□□ -0.46
COL1A1-208ENST00000494334 OR2T12Q8NG77 320 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 OR10D3Q8NH80 312 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 OR2V1Q8NHB1 315 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 ASB5Q8WWX0 329 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 FIG4Q92562 907 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 WNT2BQ93097 391 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 WFDC6Q9BQY6 131 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 ADAM19Q9H013 955 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 SERINC1Q9NRX5 453 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 PRDM4Q9UKN5 801 aa12.17□□□□□ -0.46
COL1A1-208ENST00000494334 NCOA6Q14686 2063 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-208ENST00000494334 ELOVL7A1L3X0 281 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 GJE1A6NN92 205 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 HSPB2A8KAH6 182 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 NDUFAB1O14561 156 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 CXCL13O43927 109 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 RCBTB2O95199 551 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 CLDN14O95500 239 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 TACR3P29371 465 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 CHRNB4P30926 498 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 HTR3AP46098 478 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 KCNJ5P48544 419 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 ZNF136P52737 540 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 CRYBA2P53672 197 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 COPZ1P61923 177 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 PON3Q15166 354 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 HSPB2Q16082 182 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 PDSS1Q5T2R2 415 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 HBMQ6B0K9 141 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 WBP2NLQ6ICG8 309 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 C3orf33Q6P1S2 294 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 LSRQ86X29 649 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-208ENST00000494334 LIX1LQ8IVB5 337 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 MICU2Q8IYU8 434 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 CADM2Q8N3J6 435 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 GPR32P1Q8NGA4 272 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 CA5BP1Q8WTZ4 195 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 OSTF1Q92882 214 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 TAMM41Q96BW9 452 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 TM9SF2Q99805 663 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 COQ10BQ9H8M1 238 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 PAQR5Q9NXK6 330 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-208ENST00000494334 ABCD2Q9UBJ2 740 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 CHRNA9Q9UGM1 479 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 OSGIN1Q9UJX0 560 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 FLNCQ14315 2725 aa12.16□□□□□ -0.46
COL1A1-208ENST00000494334 TMED7-TICAM2A0A0A6YYA0 188 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 A0A1W2PNR3 127 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 SLC22A20A6NK97 555 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 SYT5O00445 386 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 LGI1O95970 557 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 C8BP07358 591 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 CCNA2P20248 432 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 CD247P20963 164 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 GSK3BP49841 420 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 POLR2HP52434 150 aaKnown RBP12.15□□□□□ -0.46
COL1A1-208ENST00000494334 CARD18P57730 90 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 P4HA3Q7Z4N8 544 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 LILRB4Q8NHJ6 448 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 FNDC9Q8TBE3 224 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 SLC26A7Q8TE54 656 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 PRR14Q9BWN1 585 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 UCK2Q9BZX2 261 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 ALG2Q9H553 416 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 KLHL28Q9NXS3 571 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 TMEM181Q9P2C4 612 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 SLC13A4Q9UKG4 626 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 TMED7Q9Y3B3 224 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 ZNF175Q9Y473 711 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 BAHCC1Q9P281 2608 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 PCNX1Q96RV3 2341 aa12.15□□□□□ -0.46
COL1A1-208ENST00000494334 PHF3Q92576 2039 aaKnown RBP12.15□□□□□ -0.47
COL1A1-208ENST00000494334 KIAA1549Q9HCM3 1950 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 TMEM72A0PK05 275 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 TPST2O60704 377 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 AQP8O94778 261 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 FESP07332 822 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 CTSSP25774 331 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 FKBP2P26885 142 aaKnown RBP12.14□□□□□ -0.47
COL1A1-208ENST00000494334 HTR2AP28223 471 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 SLC7A1P30825 629 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 KDELR2P33947 212 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 AGFG1P52594 562 aaKnown RBP12.14□□□□□ -0.47
COL1A1-208ENST00000494334 SLC25A3Q00325 362 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 FOXF2Q12947 444 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 SYT14P1Q58G82 188 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 TMPPEQ6ZT21 453 aa12.14□□□□□ -0.47
COL1A1-208ENST00000494334 MAMDC2Q7Z304 686 aaPredicted RBP12.14□□□□□ -0.47
COL1A1-208ENST00000494334 PGAM4Q8N0Y7 254 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms