RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 SFRP5Q5T4F7 317 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 SHEQ5VZ18 495 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 NXNQ6DKJ4 435 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 ALKBH2Q6NS38 261 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 C3orf33Q6P1S2 294 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 ZNF704Q6ZNC4 412 aaPredicted RBP8.66□□□□□ -1.02
UFD1-210ENST00000494054 TMPPEQ6ZT21 453 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.66□□□□□ -1.02
UFD1-210ENST00000494054 ADGRG3Q86Y34 549 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 SLC43A2Q8N370 569 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 PNPT1Q8TCS8 783 aaKnown RBP8.66□□□□□ -1.02
UFD1-210ENST00000494054 IGFBPL1Q8WX77 278 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 TMEM234Q8WY98 164 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 ZNF75CPQ92670 426 aaPredicted RBP8.66□□□□□ -1.02
UFD1-210ENST00000494054 PIGTQ969N2 578 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 DNAJA3Q96EY1 480 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 PLPPR2Q96GM1 343 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 MAELQ96JY0 434 aaKnown RBP8.66□□□□□ -1.02
UFD1-210ENST00000494054 OR52B2Q96RD2 323 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 ZNF300Q96RE9 604 aaPredicted RBP8.66□□□□□ -1.02
UFD1-210ENST00000494054 CCL19Q99731 98 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 PIP5K1AQ99755 562 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 TMEM204Q9BSN7 226 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 CCDC106Q9BWC9 280 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 OR11A1Q9GZK7 315 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 OR10A4Q9H209 315 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 TMBIM4Q9HC24 238 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 FANCFQ9NPI8 374 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 SERINC1Q9NRX5 453 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 PRSS50Q9UI38 385 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 SLC35A3Q9Y2D2 325 aa8.66□□□□□ -1.02
UFD1-210ENST00000494054 RAI1Q7Z5J4 1906 aaPredicted RBP8.66□□□□□ -1.02
UFD1-210ENST00000494054 ARID1AO14497 2285 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 AGAP5A6NIR3 686 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 TRPC5OSA6NMA1 111 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 SULT2B1O00204 365 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 SMPD2O60906 423 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 SLC22A3O75751 556 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 FESP07332 822 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 TFPIP10646 304 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 HOXB4P17483 251 aaPredicted RBP8.65□□□□□ -1.02
UFD1-210ENST00000494054 CCNA2P20248 432 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 APOBEC1P41238 236 aaKnown RBP8.65□□□□□ -1.02
UFD1-210ENST00000494054 IDH2P48735 452 aaKnown RBP8.65□□□□□ -1.02
UFD1-210ENST00000494054 MVDP53602 400 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 RASGEF1BQ0VAM2 473 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 TAB1Q15750 504 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 PDCD4Q53EL6 469 aaKnown RBP8.65□□□□□ -1.02
UFD1-210ENST00000494054 SYT14P1Q58G82 188 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 Q5PR19 223 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 ATG16L1Q676U5 607 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 SEZ6L2Q6UXD5 910 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 C20orf204Q6ZNR8 217 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 LRRC74BQ6ZQY2 392 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 GRINAQ7Z429 371 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 ATG4DQ86TL0 474 aaPredicted RBP8.65□□□□□ -1.02
UFD1-210ENST00000494054 P3H2Q8IVL5 708 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 LRRC75A-AS1Q8N1F1 130 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 GLB1L3Q8NCI6 653 aaPredicted RBP8.65□□□□□ -1.02
UFD1-210ENST00000494054 STEAP2Q8NFT2 490 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 ZNF563Q8TA94 476 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 RAB3IL1Q8TBN0 382 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 OIT3Q8WWZ8 545 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 ARL8AQ96BM9 186 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 PERPQ96FX8 193 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 POM121Q96HA1 1249 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 ARL5BQ96KC2 179 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 C18orf12Q96KH6 178 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 TRNT1Q96Q11 434 aaKnown RBP8.65□□□□□ -1.02
UFD1-210ENST00000494054 ZBTB18Q99592 522 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 HDHD5Q9BXW7 423 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 EXOSC3Q9NQT5 275 aaKnown RBP8.65□□□□□ -1.02
UFD1-210ENST00000494054 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.65□□□□□ -1.02
UFD1-210ENST00000494054 NKIRAS1Q9NYS0 192 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 KLHL9Q9P2J3 617 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 LIPT1Q9Y234 373 aa8.65□□□□□ -1.02
UFD1-210ENST00000494054 DSCAMO60469 2012 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 ZNF724A8MTY0 619 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 SLCO1B7G3V0H7 640 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 RFXANKO14593 260 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 ARHGEF9O43307 516 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 RAMP1O60894 148 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 IDO1P14902 403 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 RPS4Y1P22090 263 aaKnown RBP8.64□□□□□ -1.03
UFD1-210ENST00000494054 IL32P24001 234 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 NTF4P34130 210 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 NR1H2P55055 460 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 HPCAP84074 193 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 ITGADQ13349 1161 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 P2RY6Q15077 328 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 GTDC1Q4AE62 458 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 ABLIM2Q6H8Q1 611 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 DNAJC14Q6Y2X3 702 aaPredicted RBP8.64□□□□□ -1.03
UFD1-210ENST00000494054 Q6ZT83 130 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 Q71RC1 249 aaPredicted RBP8.64□□□□□ -1.03
UFD1-210ENST00000494054 BHLHA15Q7RTS1 189 aaPredicted RBP8.64□□□□□ -1.03
UFD1-210ENST00000494054 MTDHQ86UE4 582 aaKnown RBP8.64□□□□□ -1.03
UFD1-210ENST00000494054 CIARTQ8N365 385 aaPredicted RBP8.64□□□□□ -1.03
UFD1-210ENST00000494054 ARFGAP2Q8N6H7 521 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 TRIML2Q8N7C3 387 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms