RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	FASLG	P48023	281 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	IDH3G	P51553	393 aa	Predicted RBP	10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	PRKAG1	P54619	331 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	KRT33B	Q14525	404 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	TMED2	Q15363	201 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	OR8G1	Q15617	311 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	RPE65	Q16518	533 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	NHSL2	Q5HYW2	709 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	TEDDM1	Q5T9Z0	273 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	HES3	Q5TGS1	186 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	PIWIL4	Q7Z3Z4	852 aa	Known RBP	10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	SPRED1	Q7Z699	444 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	C17orf82	Q86X59	251 aa	Predicted RBP	10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	C2CD4A	Q8NCU7	369 aa	Predicted RBP	10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	BHLHE23	Q8NDY6	225 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	TMEM203	Q969S6	136 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919		Q96MT0	163 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	DPH7	Q9BTV6	452 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	MS4A7	Q9GZW8	240 aa	Predicted RBP	10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	PPIL3	Q9H2H8	161 aa	Known RBP	10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	ZNF225	Q9UK10	706 aa		10.76	□□□□□ -0.69
BRCA1-222	ENST00000493919	FRY	Q5TBA9	3013 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919		A0A075B6Q4	140 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	TCRBV9S1A1T	A0A576	114 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	AIP	O00170	330 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	SPP1	P10451	314 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	NCF1	P14598	390 aa	Predicted RBP	10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	ARSB	P15848	533 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	SPINK2	P20155	84 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	OR1D5	P58170	312 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	ARF6	P62330	175 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	GK2	Q14410	553 aa	Predicted RBP	10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	PLA1A	Q53H76	456 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	MED27	Q6P2C8	311 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	VWA1	Q6PCB0	445 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	SPESP1	Q6UW49	350 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	CNTN4	Q8IWV2	1026 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	DYNC2LI1	Q8TCX1	351 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	SKA2	Q8WVK7	121 aa	Predicted RBP	10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	MUL1	Q969V5	352 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	CCDC124	Q96CT7	223 aa	Known RBP	10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	RHOV	Q96L33	236 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	INSM2	Q96T92	566 aa	Predicted RBP	10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	SLC30A3	Q99726	388 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	MRPL13	Q9BYD1	178 aa	Known RBP	10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	ZNF436	Q9C0F3	470 aa	Predicted RBP	10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	SLC6A16	Q9GZN6	736 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	OR52A5	Q9H2C5	316 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	C12orf65	Q9H3J6	166 aa	Known RBP	10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	RDH14	Q9HBH5	336 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	C3orf18	Q9UK00	162 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	ZDHHC8	Q9ULC8	765 aa		10.75	□□□□□ -0.69
BRCA1-222	ENST00000493919	AKAP13	Q12802	2813 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	URAD	A6NGE7	173 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	ZNF716	A6NP11	495 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	SIGLEC5	O15389	551 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	ADA	P00813	363 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	IGHE	P01854	428 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	ZNF735	P0CB33	412 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	LBP	P18428	481 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	UQCRC2	P22695	453 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	CCR6	P51684	374 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	CCL7	P80098	99 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	INSM1	Q01101	510 aa	Predicted RBP	10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	MAP4K2	Q12851	820 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	SCGB2A2	Q13296	93 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	GPR18	Q14330	331 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	NEDD8	Q15843	81 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	USF2	Q15853	346 aa	Predicted RBP	10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	TATDN3	Q17R31	274 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	ZNF658B	Q4V348	819 aa	Predicted RBP	10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	PRAMEF13	Q5VWM6	474 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	NKAIN2	Q5VXU1	208 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	ADGRD1	Q6QNK2	874 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	BAIAP2L2	Q6UXY1	529 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	PDZD3	Q86UT5	571 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	MARCH9	Q86YJ5	346 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	SELENOH	Q8IZQ5	122 aa	Known RBP	10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	CCDC54	Q8NEL0	328 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	OR1N1	Q8NGS0	311 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	ZNF596	Q8TC21	504 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	MR1	Q95460	341 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	OTULIN	Q96BN8	352 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	GFM1	Q96RP9	751 aa	Known RBP	10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	TMEM208	Q9BTX3	173 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	NUFIP1	Q9UHK0	495 aa	Known RBP	10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	TRAPPC4	Q9Y296	219 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919		A0A1W2PQM1	296 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	MED19	A0JLT2	244 aa	Predicted RBP	10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	FAM74A7	A6NL05	159 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	AGRP	O00253	132 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	OR10H3	O60404	316 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	PRAMEF2	O60811	474 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	GLRA3	O75311	464 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	ATG12	O94817	140 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	DKK1	O94907	266 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	CCNYL3	P0C7X3	344 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	RHCE	P18577	417 aa		10.74	□□□□□ -0.69
BRCA1-222	ENST00000493919	C4BPB	P20851	252 aa		10.74	□□□□□ -0.69

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