RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 RAC3P60763 192 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 RNPS1Q15287 305 aaKnown RBP20.22■□□□□ 0.83
SNIP1-203ENST00000493916 ZSWIM7Q19AV6 140 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 METTL21CQ5VZV1 264 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 ZNF440Q8IYI8 595 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 OR52P1PQ8NH57 321 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 LINC01560Q8TB33 94 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 ROBO4Q8WZ75 1007 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 DACH2Q96NX9 599 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 SLC39A3Q9BRY0 314 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 GP6Q9HCN6 339 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 BCL2L10Q9HD36 194 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 MED4Q9NPJ6 270 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 PLSCR4Q9NRQ2 329 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 VAPAQ9P0L0 249 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 PRDM4Q9UKN5 801 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 CLEC4AQ9UMR7 237 aa20.22■□□□□ 0.83
SNIP1-203ENST00000493916 CDHR4A6H8M9 788 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 AP3D1O14617 1153 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 GOSR1O95249 250 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 NUDT7P0C024 238 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 CD1EP15812 388 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 FKBP2P26885 142 aaKnown RBP20.21■□□□□ 0.83
SNIP1-203ENST00000493916 AGTR1P30556 359 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 HTR3AP46098 478 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 HSP90B2PQ58FF3 399 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 SYT14P1Q58G82 188 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 RPS26P11Q5JNZ5 115 aaPredicted RBP20.21■□□□□ 0.83
SNIP1-203ENST00000493916 RNF220Q5VTB9 566 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 ZNF836Q6ZNA1 936 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 FCRLAQ7L513 359 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 ZNF610Q8N9Z0 462 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 CTPS2Q9NRF8 586 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 CHRNA9Q9UGM1 479 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 CORO2BQ9UQ03 480 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 ZNF443Q9Y2A4 671 aaPredicted RBP20.21■□□□□ 0.83
SNIP1-203ENST00000493916 HRNRQ86YZ3 2850 aaPredicted RBP20.21■□□□□ 0.83
SNIP1-203ENST00000493916 POLQO75417 2590 aa20.21■□□□□ 0.83
SNIP1-203ENST00000493916 A0A1W2PNR3 127 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 CFAP73A6NFT4 308 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 TROVE2P10155 538 aaKnown RBP eCLIP20.2■□□□□ 0.82
SNIP1-203ENST00000493916 UQCRBP14927 111 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 IDH2P48735 452 aaKnown RBP20.2■□□□□ 0.82
SNIP1-203ENST00000493916 FAM27E3Q08E93 113 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 EPS8Q12929 822 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 LARS2Q15031 903 aaKnown RBP20.2■□□□□ 0.82
SNIP1-203ENST00000493916 VRK2Q86Y07 508 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 SLC43A2Q8N370 569 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 BBS10Q8TAM1 723 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 TSPEARQ8WU66 669 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 ABHD3Q8WU67 409 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 OR5B2Q96R09 309 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 TMEM120AQ9BXJ8 343 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 CCDC134Q9H6E4 229 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 CACYBPQ9HB71 228 aaKnown RBP20.2■□□□□ 0.82
SNIP1-203ENST00000493916 RASSF1Q9NS23 344 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 KLHL13Q9P2N7 655 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 LEF1Q9UJU2 399 aaPredicted RBP20.2■□□□□ 0.82
SNIP1-203ENST00000493916 TESMINQ9Y4I5 508 aa20.2■□□□□ 0.82
SNIP1-203ENST00000493916 SH3D21A4FU49 640 aa20.19■□□□□ 0.82
SNIP1-203ENST00000493916 POU2F1P14859 743 aa20.19■□□□□ 0.82
SNIP1-203ENST00000493916 SLC1A3P43003 542 aa20.19■□□□□ 0.82
SNIP1-203ENST00000493916 GCNT6Q5T4J0 391 aa20.19■□□□□ 0.82
SNIP1-203ENST00000493916 DLEU7Q6UYE1 221 aa20.19■□□□□ 0.82
SNIP1-203ENST00000493916 CDH24Q86UP0 819 aa20.19■□□□□ 0.82
SNIP1-203ENST00000493916 DPP10Q8N608 796 aa20.19■□□□□ 0.82
SNIP1-203ENST00000493916 MAL2Q969L2 176 aa20.19■□□□□ 0.82
SNIP1-203ENST00000493916 GPATCH1Q9BRR8 931 aaKnown RBP20.19■□□□□ 0.82
SNIP1-203ENST00000493916 TACO1Q9BSH4 297 aaKnown RBP20.19■□□□□ 0.82
SNIP1-203ENST00000493916 FGFR1OP2Q9NVK5 253 aa20.19■□□□□ 0.82
SNIP1-203ENST00000493916 RLIMQ9NVW2 624 aa20.19■□□□□ 0.82
SNIP1-203ENST00000493916 NDRG3Q9UGV2 375 aa20.19■□□□□ 0.82
SNIP1-203ENST00000493916 IFT52Q9Y366 437 aa20.19■□□□□ 0.82
SNIP1-203ENST00000493916 AKAP9Q99996 3911 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 UQCRHLA0A096LP55 91 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 PRKD3O94806 890 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 ARAFP10398 606 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 CCKARP32238 428 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 UGT2B10P36537 528 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 CLK1P49759 484 aaKnown RBP20.18■□□□□ 0.82
SNIP1-203ENST00000493916 DIO1P49895 249 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 POLR2HP52434 150 aaKnown RBP20.18■□□□□ 0.82
SNIP1-203ENST00000493916 CSNK2A1P68400 391 aaPredicted RBP20.18■□□□□ 0.82
SNIP1-203ENST00000493916 TMPPEQ6ZT21 453 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 ADGRG3Q86Y34 549 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 CPPED1Q9BRF8 314 aaPredicted RBP20.18■□□□□ 0.82
SNIP1-203ENST00000493916 SPATA9Q9BWV2 254 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 CLEC4MQ9H2X3 399 aaPredicted RBP20.18■□□□□ 0.82
SNIP1-203ENST00000493916 ARMC7Q9H6L4 198 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 MRGBPQ9NV56 204 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.18■□□□□ 0.82
SNIP1-203ENST00000493916 ZNF232Q9UNY5 417 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 NDUFAF1Q9Y375 327 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 HDGFL3Q9Y3E1 203 aa20.18■□□□□ 0.82
SNIP1-203ENST00000493916 ANKRD17O75179 2603 aaKnown RBP20.18■□□□□ 0.82
SNIP1-203ENST00000493916 ENO4A6NNW6 628 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 C5orf58C9J3I9 102 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 ANGPT2O15123 496 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 SMAD9O15198 467 aaKnown RBP20.17■□□□□ 0.82
SNIP1-203ENST00000493916 PGM3O95394 542 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms