RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ATP6V1C2Q8NEY4 427 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 NLGN4YQ8NFZ3 816 aaPredicted RBP12.72□□□□□ -0.37
VCP-207ENST00000493886 OR10Z1Q8NGY1 313 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 SLC25A46Q96AG3 418 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 CCDC120Q96HB5 630 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 ST6GAL2Q96JF0 529 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 TEX12Q9BXU0 123 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 TBC1D17Q9HA65 648 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 RANGRFQ9HD47 186 aaPredicted RBP12.72□□□□□ -0.37
VCP-207ENST00000493886 IGHV5-51A0A0C4DH38 117 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 BLACEA4D250 179 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 KDM4EB2RXH2 506 aaPredicted RBP12.71□□□□□ -0.37
VCP-207ENST00000493886 LMO7DNF2Z398 122 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 CLDN4O14493 209 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 LYPD3O95274 346 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 CSF3P09919 207 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 SELLP14151 372 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 NXPH1P58417 271 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 IGLV3-21P80748 117 aaPredicted RBP12.71□□□□□ -0.37
VCP-207ENST00000493886 PGGHGQ32M88 737 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 MINDY4Q4G0A6 757 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 ZNF565Q8N9K5 539 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 OR4N2Q8NGD1 307 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 ADAMTS18Q8TE60 1221 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 TP53INP1Q96A56 240 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 MMABQ96EY8 250 aaPredicted RBP12.71□□□□□ -0.37
VCP-207ENST00000493886 TMED9Q9BVK6 235 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 PAQR5Q9NXK6 330 aaPredicted RBP12.71□□□□□ -0.37
VCP-207ENST00000493886 PLEKHB1Q9UF11 243 aaPredicted RBP12.71□□□□□ -0.37
VCP-207ENST00000493886 FBXL21Q9UKT6 434 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 CLDN16Q9Y5I7 305 aa12.71□□□□□ -0.37
VCP-207ENST00000493886 OR2W5A6NFC9 320 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 TLCD2A6NGC4 264 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 SURF4O15260 269 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 LALBAP00709 142 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 APEX1P27695 318 aaKnown RBP12.71□□□□□ -0.38
VCP-207ENST00000493886 MTNR1AP48039 350 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 STARD6P59095 220 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 RAB40BQ12829 278 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 C3orf38Q5JPI3 329 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 COL13A1Q5TAT6 717 aaPredicted RBP12.71□□□□□ -0.38
VCP-207ENST00000493886 GARNL3Q5VVW2 1013 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 RNF113BQ8IZP6 322 aaKnown RBP12.71□□□□□ -0.38
VCP-207ENST00000493886 METTL27Q8N6F8 245 aaPredicted RBP12.71□□□□□ -0.38
VCP-207ENST00000493886 CLDN22Q8N7P3 220 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 ZNF614Q8N883 585 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 OR4F15Q8NGB8 312 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 TMEM239Q8WW34 195 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 ARSGQ96EG1 525 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 SAMD8Q96LT4 415 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 DGAT2Q96PD7 388 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 DEPDC7Q96QD5 511 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 SMAD5Q99717 465 aaKnown RBP12.71□□□□□ -0.38
VCP-207ENST00000493886 DPH1Q9BZG8 443 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 MOV10Q9HCE1 1003 aaKnown RBP12.71□□□□□ -0.38
VCP-207ENST00000493886 FGF20Q9NP95 211 aaPredicted RBP12.71□□□□□ -0.38
VCP-207ENST00000493886 ZNF223Q9UK11 482 aaPredicted RBP12.71□□□□□ -0.38
VCP-207ENST00000493886 GMEB2Q9UKD1 530 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 TRAPPC4Q9Y296 219 aa12.71□□□□□ -0.38
VCP-207ENST00000493886 SPAG17Q6Q759 2223 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 IRGMA1A4Y4 181 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 FNTBP49356 437 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 SCN1BQ07699 218 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 ZNF267Q14586 743 aaPredicted RBP12.7□□□□□ -0.38
VCP-207ENST00000493886 ZNF791Q3KP31 576 aaPredicted RBP12.7□□□□□ -0.38
VCP-207ENST00000493886 OGFOD3Q6PK18 319 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 PAMR1Q6UXH9 720 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 OR2T33Q8NG76 320 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 PFN4Q8NHR9 129 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 FANK1Q8TC84 345 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 CNOT9Q92600 299 aaKnown RBP12.7□□□□□ -0.38
VCP-207ENST00000493886 ART5Q96L15 291 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 VSTM2LQ96N03 204 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 KATNB1Q9BVA0 655 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 HDHD5Q9BXW7 423 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 PDE7BQ9NP56 450 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 DTX4Q9Y2E6 619 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 PCDH15Q96QU1 1955 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 SYNDIG1LA6NDD5 238 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 CCDC182A6NF36 153 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 UNC119BA6NIH7 251 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 CENPXA8MT69 81 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 DVL2O14641 736 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 IGKV1D-16P01601 117 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 DRD5P21918 477 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 WNT4P56705 351 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 FABP5Q01469 135 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 FAPQ12884 760 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 SGCAQ16586 387 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 C14orf28Q4W4Y0 310 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 NKAIN2Q5VXU1 208 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 PTCRAQ6ISU1 281 aaPredicted RBP12.7□□□□□ -0.38
VCP-207ENST00000493886 C1orf216Q8TAB5 229 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 KCTD7Q96MP8 289 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 SEC22CQ9BRL7 303 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 C20orf141Q9NUB4 165 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 MED17Q9NVC6 651 aa12.7□□□□□ -0.38
VCP-207ENST00000493886 A0A0B4J293 547 aa12.69□□□□□ -0.38
VCP-207ENST00000493886 CASKO14936 926 aa12.69□□□□□ -0.38
VCP-207ENST00000493886 IFI30P13284 250 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms