RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 OR7D2Q96RA2 312 aa12.02□□□□□ -0.49
SAMM50-204ENST00000493161 SDF2Q99470 211 aa12.02□□□□□ -0.49
SAMM50-204ENST00000493161 INPP5KQ9BT40 448 aa12.02□□□□□ -0.49
SAMM50-204ENST00000493161 AMBRA1Q9C0C7 1298 aa12.02□□□□□ -0.49
SAMM50-204ENST00000493161 SERHL2Q9H4I8 314 aa12.02□□□□□ -0.49
SAMM50-204ENST00000493161 FAF1Q9UNN5 650 aaPredicted RBP12.02□□□□□ -0.49
SAMM50-204ENST00000493161 TRAF6Q9Y4K3 522 aa12.02□□□□□ -0.49
SAMM50-204ENST00000493161 ATP23Q9Y6H3 246 aa12.02□□□□□ -0.49
SAMM50-204ENST00000493161 ANK2Q01484 3957 aa12.02□□□□□ -0.49
SAMM50-204ENST00000493161 IGKV3D-15A0A087WSY6 115 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 SERINC4A6NH21 518 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 VWC2LB2RUY7 222 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 SULT2B1O00204 365 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 FCMRO60667 390 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 ITGA5P08648 1049 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 SRD5A1P18405 259 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 THBS2P35442 1172 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 ASMTP46597 345 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 EFNA4P52798 201 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 NAA20P61599 178 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 MERTKQ12866 999 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 CBFBQ13951 182 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 GGTLC2Q14390 218 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 GABRA6Q16445 453 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 MST1LQ2TV78 715 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 UGT3A2Q3SY77 523 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 SPDYE7PQ495Y7 208 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 SYT14P1Q58G82 188 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 FAM120AOSQ5T036 256 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 KLHL17Q6TDP4 642 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 TRMT10CQ7L0Y3 403 aaKnown RBP12.01□□□□□ -0.49
SAMM50-204ENST00000493161 R3HCC1LQ7Z5L2 792 aaKnown RBP12.01□□□□□ -0.49
SAMM50-204ENST00000493161 MTDHQ86UE4 582 aaKnown RBP12.01□□□□□ -0.49
SAMM50-204ENST00000493161 C10orf107Q8IVU9 208 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 CCDC103Q8IW40 242 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 CLEC4FQ8N1N0 589 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 KRTCAP2Q8N6L1 136 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 OR56A1Q8NGH5 318 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 OR5P2Q8WZ92 322 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 PROX1Q92786 737 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 APH1AQ96BI3 265 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 MSI2Q96DH6 328 aaKnown RBP12.01□□□□□ -0.49
SAMM50-204ENST00000493161 ARL5BQ96KC2 179 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 MUS81Q96NY9 551 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 PRR14Q9BWN1 585 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 GATA5Q9BWX5 397 aaPredicted RBP12.01□□□□□ -0.49
SAMM50-204ENST00000493161 LAT2Q9GZY6 243 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 NOSIPQ9Y314 301 aaKnown RBP12.01□□□□□ -0.49
SAMM50-204ENST00000493161 PLCE1Q9P212 2302 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 MALRD1Q5VYJ5 2156 aa12.01□□□□□ -0.49
SAMM50-204ENST00000493161 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12□□□□□ -0.491e-8■□□□□ 8.4
SAMM50-204ENST00000493161 LOC100289279A0A1B0GTE1 492 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 ATP6V1G2-DDX39BF2Z307 99 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 PIP5K1BO14986 540 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 CHRNGP07510 517 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 NEFHP12036 1026 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 HPCAL1P37235 193 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 PTGR1Q14914 329 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 PDK3Q15120 406 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 GPR68Q15743 365 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 CCDC153Q494R4 210 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 ZNF544Q6NX49 715 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 RNF165Q6ZSG1 346 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 SSX8Q7RTT4 187 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 DDIASQ8IXT1 998 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 CCDC63Q8NA47 563 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 C3orf49Q96BT1 292 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 SOX7Q9BT81 388 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 TXLNGYQ9BZA5 131 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 OR11A1Q9GZK7 315 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 EML4Q9HC35 981 aaKnown RBP12□□□□□ -0.49
SAMM50-204ENST00000493161 CTPS2Q9NRF8 586 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 ASB6Q9NWX5 421 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 TAS2R16Q9NYV7 291 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 EMC3Q9P0I2 261 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 MKLN1Q9UL63 735 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 TMED5Q9Y3A6 229 aa12□□□□□ -0.49
SAMM50-204ENST00000493161 IGHV4-61A0A0C4DH41 118 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 PDLIM1O00151 329 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 PEX11AO75192 247 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 UGT2B17O75795 530 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 SHBGP04278 402 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 UBTFL6P0CB48 400 aaPredicted RBP11.99□□□□□ -0.49
SAMM50-204ENST00000493161 TFPIP10646 304 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 CRHR1P34998 444 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 GZMKP49863 264 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 CSNK2A1P68400 391 aaPredicted RBP11.99□□□□□ -0.49
SAMM50-204ENST00000493161 PCLAFQ15004 111 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 ZNF141Q15928 474 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 MAPK14Q16539 360 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 SWI5Q1ZZU3 235 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 FAM166AQ6J272 317 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 HMGN2P46Q86SG4 172 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 DEPDC4Q8N2C3 294 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 TWIST2Q8WVJ9 160 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 ST8SIA1Q92185 356 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 C3orf30Q96M34 536 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 C16orf45Q96MC5 204 aaPredicted RBP11.99□□□□□ -0.49
SAMM50-204ENST00000493161 SORCS2Q96PQ0 1159 aa11.99□□□□□ -0.49
SAMM50-204ENST00000493161 C1orf50Q9BV19 199 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms