RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	FAM58BP	P0C7Q3	252 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	MYZAP	P0CAP1	466 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	CD1D	P15813	335 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	POR	P16435	677 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	CDH2	P19022	906 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	NPR2	P20594	1047 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	SSTR1	P30872	391 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	TIA1	P31483	386 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	THBS4	P35443	961 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	KRT6C	P48668	564 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	XK	P51811	444 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	FOXG1	P55316	489 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	NAA20	P61599	178 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	ETF1	P62495	437 aa	Known RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	DLG1	Q12959	904 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	CUL3	Q13618	768 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	GTF2H2	Q13888	395 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	OR4D1	Q15615	310 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	CPSF6	Q16630	551 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	ERCC6L	Q2NKX8	1250 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	GLE1	Q53GS7	698 aa	Known RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	TEX35	Q5T0J7	233 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	C9orf135	Q5VTT2	229 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	C8orf74	Q6P047	294 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	GTF2H2C	Q6P1K8	395 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	GALNT18	Q6P9A2	607 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	IKBIP	Q70UQ0	350 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	MARCH3	Q86UD3	253 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	LCA5	Q86VQ0	697 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	LAS2	Q8IYD9	372 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	CDK20	Q8IZL9	346 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	LILRA2	Q8N149	483 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	SLC43A2	Q8N370	569 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	PDPR	Q8NCN5	879 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	DEFB108B	Q8NET1	73 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	OR7G3	Q8NG95	312 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	TRPC4AP	Q8TEL6	797 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	CKAP2	Q8WWK9	683 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	IFT81	Q8WYA0	676 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	SLC9A6	Q92581	669 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	YIPF5	Q969M3	257 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	MRRF	Q96E11	262 aa	Known RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	WDR34	Q96EX3	536 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	UBXN10	Q96LJ8	280 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	RNF145	Q96MT1	663 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	ZNF300	Q96RE9	604 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	MTERF1	Q99551	399 aa	Known RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	LRRC1	Q9BTT6	524 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	CHIA	Q9BZP6	476 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	VPS11	Q9H270	941 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	OR51B5	Q9H339	312 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	MARCH7	Q9H992	704 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	PFDN4	Q9NQP4	134 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	SLC6A13	Q9NSD5	602 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	ASB6	Q9NWX5	421 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	FAM120C	Q9NX05	1096 aa	Known RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	SENP1	Q9P0U3	644 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	CPSF2	Q9P2I0	782 aa	Known RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	SEC14L4	Q9UDX3	406 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	PRODH2	Q9UF12	536 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	ADAM29	Q9UKF5	820 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	AMDHD2	Q9Y303	409 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	TET2	Q6N021	2002 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602		A0A096LPK6	155 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	IGHV1-18	A0A0C4DH31	117 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	FAM159B	A6NKW6	160 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	ARHGAP32	A7KAX9	2087 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602		H0YIV9	168 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	KIF2A	O00139	706 aa	Predicted RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	FADS1	O60427	444 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	URI1	O94763	535 aa	Predicted RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	CBX7	O95931	251 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	WNT11	O96014	354 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	IGHV2-5	P01817	119 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	GBA	P04062	536 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	GSTA1	P08263	222 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	SNRPA	P09012	282 aa	Known RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	NHLRC4	P0CG21	123 aa	Predicted RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	CT45A8	P0DMV1	189 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	CT45A9	P0DMV2	189 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	IGHV4-38-2	P0DP08	117 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	LYL1	P12980	280 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	CPM	P14384	443 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	CSNK2A2	P19784	350 aa	Predicted RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	FUT4	P22083	530 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	SHC1	P29353	583 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	MPI	P34949	423 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	EMD	P50402	254 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	MAPK12	P53778	367 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	MANF	P55145	182 aa	Known RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	CORO7	P57737	925 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	PRPS1	P60891	318 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	CSTF3	Q12996	717 aa	Known RBP	4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	CDK5R2	Q13319	367 aa		4.59	□□□□□ -1.67
SEC13-219	ENST00000492602	HEPACAM	Q14CZ8	416 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms