RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 YTHDF3Q7Z739 585 aaKnown RBP7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 P2RY8Q86VZ1 359 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 ADGRG3Q86Y34 549 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 CMIPQ8IY22 773 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 VPS37AQ8NEZ2 397 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 RAB3IL1Q8TBN0 382 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 SLC25A43Q8WUT9 341 aaPredicted RBP7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 TMEM234Q8WY98 164 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 CHMP6Q96FZ7 201 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 TEX37Q96LM6 180 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 Q96MF0 132 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 TRNT1Q96Q11 434 aaKnown RBP7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 DPY30Q9C005 99 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 QRSL1Q9H0R6 528 aaKnown RBP7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 C12orf49Q9H741 205 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 EXD2Q9NVH0 621 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 PCDHGB4Q9UN71 923 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 TRAPPC4Q9Y296 219 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 SLC35A3Q9Y2D2 325 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 GPR45Q9Y5Y3 372 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 CR1P17927 2039 aa7.42□□□□□ -1.22
SMARCB1-207ENST00000491967 A0A1W2PNR3 127 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 WDR91A4D1P6 747 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 E9PBE3 544 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 SDHDO14521 159 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 ZNF500O60304 480 aaPredicted RBP7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 SNNO75324 88 aaPredicted RBP7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 PMS2P2O95744 297 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 C1QCP02747 245 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 UBTFL6P0CB48 400 aaPredicted RBP7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 OR12D1P0DN82 309 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 PGCP20142 388 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 IGHV1-2P23083 117 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 IL12AP29459 219 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 ADSLP30566 484 aaPredicted RBP7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 DIO1P49895 249 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 RNF144AP50876 292 aaPredicted RBP7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 MAP2K6P52564 334 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 MVDP53602 400 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 WDR4P57081 412 aaKnown RBP7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 KCNJ10P78508 379 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 LRRC74AQ0VAA2 488 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 RASGEF1BQ0VAM2 473 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 BST1Q10588 318 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 STX3Q13277 289 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 SYT14P1Q58G82 188 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 C1QTNF12Q5T7M4 302 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 ATAD3BQ5T9A4 648 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 OLIG3Q7RTU3 272 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 C16orf62Q7Z3J2 963 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 GRINAQ7Z429 371 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 ANKRD46Q86W74 232 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 ZNF619Q8N2I2 560 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 OR4A15Q8NGL6 344 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 TMEM171Q8WVE6 324 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 XAGE5Q8WWM1 108 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 AKAP1Q92667 903 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 RAB8BQ92930 207 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 KISS1RQ969F8 398 aaPredicted RBP7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 ARL8AQ96BM9 186 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 ROPN1LQ96C74 230 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 BOD1Q96IK1 185 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 MAELQ96JY0 434 aaKnown RBP7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 ARL5BQ96KC2 179 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 SLC35G5Q96KT7 338 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 ZNF300Q96RE9 604 aaPredicted RBP7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 POTEKPQ9BYX7 375 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 NUF2Q9BZD4 464 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 TRIM2Q9C040 744 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 ADAM19Q9H013 955 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 SLC38A1Q9H2H9 487 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 CXorf56Q9H5V9 222 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 SERINC1Q9NRX5 453 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 PNPOQ9NVS9 261 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 AIG1Q9NVV5 245 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 CHRNA9Q9UGM1 479 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 LIPT1Q9Y234 373 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 HDGFL3Q9Y3E1 203 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 WDR45Q9Y484 360 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 ATRQ13535 2644 aa7.41□□□□□ -1.22
SMARCB1-207ENST00000491967 ARFGEF3Q5TH69 2177 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 IGHV3-15A0A0B4J1V0 119 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 TRIM64A6NGJ6 449 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 TRIM64BA6NI03 449 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 PDLIM1O00151 329 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 SULT2B1O00204 365 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 HDAC3O15379 428 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 ZNF208O43345 1280 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 CD8AP01732 235 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 PGRP06401 933 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 SOD3P08294 240 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 ZCCHC18P0CG32 403 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 BGNP21810 368 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 SLC7A1P30825 629 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 SOAT1P35610 550 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 KHKP50053 298 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 CASP9P55211 416 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 UFM1P61960 85 aa7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 CSNK2A1P68400 391 aaPredicted RBP7.4□□□□□ -1.22
SMARCB1-207ENST00000491967 CHRNEQ04844 493 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms