RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 SYT5O00445 386 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 ACTL6AO96019 429 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 LINGO3P0C6S8 592 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 HK1P19367 917 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 CHMP24386 653 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 GCKP35557 465 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 EIF1P41567 113 aaKnown RBP13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 CRYBA2P53672 197 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 IST1P53990 364 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 B3GALT5-AS1P59052 145 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 MXRA7P84157 204 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 SLC25A3Q00325 362 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 SLC25A53Q5H9E4 307 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 WIPI1Q5MNZ9 446 aaPredicted RBP13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 SAMD4BQ5PRF9 694 aaKnown RBP13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 DCST1Q5T197 706 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 VASNQ6EMK4 673 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 YRDCQ86U90 279 aaKnown RBP13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 ARMC8Q8IUR7 673 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 LACC1Q8IV20 430 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 ARHGAP24Q8N264 748 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 GTPBP8Q8N3Z3 284 aaPredicted RBP13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 TMCO5AQ8N6Q1 288 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 GPR119Q8TDV5 335 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 RASSF5Q8WWW0 418 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 ST8SIA1Q92185 356 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 CNOT9Q92600 299 aaKnown RBP13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 KLHDC3Q9BQ90 382 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 PIGQQ9BRB3 760 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 CXXC4Q9H2H0 198 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 PIF1Q9H611 641 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 CRIM1Q9NZV1 1036 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 USP22Q9UPT9 525 aa13.53□□□□□ -0.24
CDC42SE1-205ENST00000491825 HEATR5AQ86XA9 2040 aa13.52□□□□□ -0.24
CDC42SE1-205ENST00000491825 PCNX3Q9H6A9 2034 aa13.52□□□□□ -0.24
CDC42SE1-205ENST00000491825 FREM3P0C091 2139 aa13.52□□□□□ -0.24
CDC42SE1-205ENST00000491825 NTN1O95631 604 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 C8BP07358 591 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 HSD17B1P14061 328 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 UQCRBP14927 111 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 PRKCAP17252 672 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 PGCP20142 388 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 BMP5P22003 454 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 PSMA4P25789 261 aaKnown RBP13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 ELK4P28324 431 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 ADH6P28332 368 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 TIMP3P35625 211 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 ASCL1P50553 236 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 CCR4P51679 360 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 ZNF136P52737 540 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 AAGABQ6PD74 315 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 C6orf89Q6UWU4 347 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 DEFB107AQ8IZN7 70 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 CLIP4Q8N3C7 705 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 NINJ1Q92982 152 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 TAMM41Q96BW9 452 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 MRGPRX4Q96LA9 322 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 SFXN2Q96NB2 322 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 KCTD14Q9BQ13 255 aaPredicted RBP13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 PINK1Q9BXM7 581 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 RSPO3Q9BXY4 272 aaPredicted RBP13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 UGT2B28Q9BY64 529 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 RLIMQ9NVW2 624 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 ADA2Q9NZK5 511 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 VDAC3Q9Y277 283 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 SLC6A5Q9Y345 797 aa13.52□□□□□ -0.25
CDC42SE1-205ENST00000491825 MED13LQ71F56 2210 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 OR2M5A3KFT3 312 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 CFAP73A6NFT4 308 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 M0QX08 132 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 DVL2O14641 736 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 GMFGO60234 142 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 ADAM11O75078 769 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 NUDT14O95848 222 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 IFNA14P01570 189 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 BMP7P18075 431 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 KDELR2P33947 212 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 PEX19P40855 299 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 KIR2DL3P43628 341 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 DMTNQ08495 405 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 EPS8Q12929 822 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 BNIP1Q12981 228 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 QPRTQ15274 297 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 RAET1LQ5VY80 246 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 NSUN5P2Q63ZY6 315 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 ZNF550Q7Z398 422 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 PM20D2Q8IYS1 436 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 TMEM234Q8WY98 164 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 WDYHV1Q96HA8 205 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 FOXC2Q99958 501 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 LIME1Q9H400 295 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 RASSF1Q9NS23 344 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 TAS2R1Q9NYW7 299 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 ZNF629Q9UEG4 869 aaPredicted RBP13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 CD300AQ9UGN4 299 aa13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 PRPF19Q9UMS4 504 aaKnown RBP13.51□□□□□ -0.25
CDC42SE1-205ENST00000491825 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.5□□□□□ -0.25
CDC42SE1-205ENST00000491825 MBD3L4A6NDZ8 208 aaPredicted RBP13.5□□□□□ -0.25
CDC42SE1-205ENST00000491825 MBD3L3A6NE82 208 aaPredicted RBP13.5□□□□□ -0.25
CDC42SE1-205ENST00000491825 MBD3L5A6NJ08 208 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms