RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 SAXO2Q658L1 398 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 Q6ZT83 130 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 KIRREL3Q8IZU9 778 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 DNAJA3Q96EY1 480 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 USB1Q9BQ65 265 aaKnown RBP16.3■□□□□ 0.2
SMIM4-205ENST00000491607 PARD6BQ9BYG5 372 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 ACER3Q9NUN7 267 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 ZNF701Q9NV72 531 aaPredicted RBP16.3■□□□□ 0.2
SMIM4-205ENST00000491607 PNPOQ9NVS9 261 aa16.3■□□□□ 0.2
SMIM4-205ENST00000491607 SPIN1Q9Y657 262 aaPredicted RBP16.3■□□□□ 0.2
SMIM4-205ENST00000491607 E9PBE3 544 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 ANKRD28O15084 1053 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 TMCC2O75069 709 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 BCAS1O75363 584 aaPredicted RBP16.29■□□□□ 0.2
SMIM4-205ENST00000491607 PAX1P15863 534 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 S100A3P33764 101 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 APOBEC1P41238 236 aaKnown RBP16.29■□□□□ 0.2
SMIM4-205ENST00000491607 RPS4XP62701 263 aaKnown RBP16.29■□□□□ 0.2
SMIM4-205ENST00000491607 FUT5Q11128 374 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 CASP8Q14790 479 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 FRRS1Q6ZNA5 592 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 TMPPEQ6ZT21 453 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 GALNT5Q7Z7M9 940 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 ATG4DQ86TL0 474 aaPredicted RBP16.29■□□□□ 0.2
SMIM4-205ENST00000491607 ZNF100Q8IYN0 542 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 LILRB1Q8NHL6 650 aaPredicted RBP16.29■□□□□ 0.2
SMIM4-205ENST00000491607 SLC25A43Q8WUT9 341 aaPredicted RBP16.29■□□□□ 0.2
SMIM4-205ENST00000491607 FBXW5Q969U6 566 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 NEURL3Q96EH8 262 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 CTPS2Q9NRF8 586 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 POLE3Q9NRF9 147 aa16.29■□□□□ 0.2
SMIM4-205ENST00000491607 DSCAMO60469 2012 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 ZNF724A8MTY0 619 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 EDNRAP25101 427 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 PCSK6P29122 969 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 BSPH1Q075Z2 132 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 MPP2Q14168 576 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 ADAM5Q6NVV9 412 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 RNF130Q86XS8 419 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 LRRC34Q8IZ02 419 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 ARFGAP2Q8N6H7 521 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 FAM71CQ8NEG0 241 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 OIT3Q8WWZ8 545 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 NEUROG1Q92886 237 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 ZG16BQ96DA0 208 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 ZHX1-C8orf76Q96EF9 292 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 CCDC106Q9BWC9 280 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 SAP130Q9H0E3 1048 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 MEAF6Q9HAF1 191 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 EMC3Q9P0I2 261 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 CHRNA9Q9UGM1 479 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 HAO1Q9UJM8 370 aa16.28■□□□□ 0.2
SMIM4-205ENST00000491607 CLDN24A6NM45 220 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 IGHV3-9P01782 118 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 C1QCP02747 245 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 GUSBP08236 651 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 CCNA2P20248 432 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 UFM1P61960 85 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 KCNJ10P78508 379 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 CHRNEQ04844 493 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 BST1Q10588 318 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 PPA1Q15181 289 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 GRINAQ7Z429 371 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 MTDHQ86UE4 582 aaKnown RBP16.27■□□□□ 0.2
SMIM4-205ENST00000491607 UBE2J2Q8N2K1 259 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 TRIML2Q8N7C3 387 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 ANKRD42Q8N9B4 389 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 KBTBD8Q8NFY9 601 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 PIWIL2Q8TC59 973 aaKnown RBP16.27■□□□□ 0.2
SMIM4-205ENST00000491607 SMAP2Q8WU79 429 aaPredicted RBP16.27■□□□□ 0.2
SMIM4-205ENST00000491607 ZNF75CPQ92670 426 aaPredicted RBP16.27■□□□□ 0.2
SMIM4-205ENST00000491607 GTPBP3Q969Y2 492 aaKnown RBP16.27■□□□□ 0.2
SMIM4-205ENST00000491607 MUCL1Q96DR8 90 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 TEX37Q96LM6 180 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 CCDC115Q96NT0 180 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 PANX1Q96RD7 426 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.27■□□□□ 0.2
SMIM4-205ENST00000491607 BTNL2Q9UIR0 455 aa16.27■□□□□ 0.2
SMIM4-205ENST00000491607 A0A1W2PP18 115 aa16.26■□□□□ 0.19
SMIM4-205ENST00000491607 HMGN4O00479 90 aa16.26■□□□□ 0.19
SMIM4-205ENST00000491607 SOD3P08294 240 aa16.26■□□□□ 0.19
SMIM4-205ENST00000491607 ALDOCP09972 364 aaKnown RBP16.26■□□□□ 0.19
SMIM4-205ENST00000491607 GGT1P19440 569 aa16.26■□□□□ 0.19
SMIM4-205ENST00000491607 IGHV1-2P23083 117 aa16.26■□□□□ 0.19
SMIM4-205ENST00000491607 IDH2P48735 452 aaKnown RBP16.26■□□□□ 0.19
SMIM4-205ENST00000491607 ZNF672Q499Z4 452 aaPredicted RBP16.26■□□□□ 0.19
SMIM4-205ENST00000491607 HHATQ5VTY9 493 aa16.26■□□□□ 0.19
SMIM4-205ENST00000491607 ABLIM2Q6H8Q1 611 aa16.26■□□□□ 0.19
SMIM4-205ENST00000491607 TRMT61AQ96FX7 289 aaKnown RBP16.26■□□□□ 0.19
SMIM4-205ENST00000491607 ARL5BQ96KC2 179 aa16.26■□□□□ 0.19
SMIM4-205ENST00000491607 OR11A1Q9GZK7 315 aa16.26■□□□□ 0.19
SMIM4-205ENST00000491607 EXOSC3Q9NQT5 275 aaKnown RBP16.26■□□□□ 0.19
SMIM4-205ENST00000491607 AIG1Q9NVV5 245 aa16.26■□□□□ 0.19
SMIM4-205ENST00000491607 NOSIPQ9Y314 301 aaKnown RBP16.26■□□□□ 0.19
SMIM4-205ENST00000491607 MAGED1Q9Y5V3 778 aaPredicted RBP16.26■□□□□ 0.19
SMIM4-205ENST00000491607 HEATR5AQ86XA9 2040 aa16.26■□□□□ 0.19
SMIM4-205ENST00000491607 PRAMEF27A3QJZ7 478 aa16.25■□□□□ 0.19
SMIM4-205ENST00000491607 DPRXA6NFQ7 191 aa16.25■□□□□ 0.19
SMIM4-205ENST00000491607 CCDC154A6NI56 674 aa16.25■□□□□ 0.19
SMIM4-205ENST00000491607 CDKN1AP38936 164 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms