RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 SH3BP4Q9P0V3 963 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 MOKQ9UQ07 419 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 CCL27Q9Y4X3 112 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 PKD1L1Q8TDX9 2849 aa11.92□□□□□ -0.5
CTDSP1-210ENST00000491064 ZNF264O43296 627 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 EIF4E2O60573 245 aaKnown RBP11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 SEC22BO75396 215 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 SNRPAP09012 282 aaKnown RBP11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 EFNA1P20827 205 aaPredicted RBP11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 PRPH2P23942 346 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 IL2RGP31785 369 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 COMPP49747 757 aaPredicted RBP11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 CCR4P51679 360 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 SNRPD2P62316 118 aaKnown RBP11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 MLC1Q15049 377 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 ZSWIM7Q19AV6 140 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 SYT14P1Q58G82 188 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 DCST2Q5T1A1 773 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 C17orf53Q8N3J3 647 aaPredicted RBP11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 C17orf78Q8N4C9 275 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 ZNF614Q8N883 585 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 SEMA6DQ8NFY4 1073 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 SGMS2Q8NHU3 365 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 ZFAND2BQ8WV99 257 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 VRK1Q99986 396 aaPredicted RBP11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 ZCCHC3Q9NUD5 404 aaKnown RBP11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 AMDHD2Q9Y303 409 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 DTNAQ9Y4J8 743 aa11.91□□□□□ -0.5
CTDSP1-210ENST00000491064 GPR171O14626 319 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 DNAJA2O60884 412 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 MRPL33O75394 65 aaKnown RBP11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 UBL4AP11441 157 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 SDC1P18827 310 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 SLC16A1P53985 500 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 C9orf135Q5VTT2 229 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 SLC46A3Q7Z3Q1 461 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 CCNYL1Q8N7R7 359 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 LINC01356Q8N9X3 169 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 C1orf162Q8NEQ5 155 aaPredicted RBP11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 ST8SIA1Q92185 356 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 HPS1Q92902 700 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 FCRL1Q96LA6 429 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 TSSK3Q96PN8 268 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 CCT7Q99832 543 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 TNFRSF12AQ9NP84 129 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 DCTN4Q9UJW0 460 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 KCNE3Q9Y6H6 103 aa11.9□□□□□ -0.5
CTDSP1-210ENST00000491064 A0A0A6YYJ9 748 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 SLCO1B7G3V0H7 640 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 LILRA1O75019 489 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 CRCPO75575 148 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 SLU7O95391 586 aaKnown RBP11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 STAMBPO95630 424 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 TACSTD2P09758 323 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 GIFP27352 417 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 SERPINF1P36955 418 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 CHN2P52757 468 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 SESN3P58005 492 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 MERTKQ12866 999 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 SKP2Q13309 424 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 PDZK1Q5T2W1 519 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 TIFABQ6ZNK6 161 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 LCA5Q86VQ0 697 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 CLHC1Q8NHS4 586 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 PIGXQ8TBF5 258 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 ADAMTS15Q8TE58 950 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 SLC25A43Q8WUT9 341 aaPredicted RBP11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 THUMPD3Q9BV44 507 aaKnown RBP11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 ACTRT3Q9BYD9 372 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 OCEL1Q9H607 264 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 SERINC1Q9NRX5 453 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 C1orf109Q9NX04 203 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 BAIAP2L1Q9UHR4 511 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 METRNQ9UJH8 293 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 PTGDR2Q9Y5Y4 395 aa11.89□□□□□ -0.51
CTDSP1-210ENST00000491064 B9A039 149 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 APEX1P27695 318 aaKnown RBP11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 CDH15P55291 814 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 ACTG1P63261 375 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 C1QTNF12Q5T7M4 302 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 CASP12Q6UXS9 341 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 DEF8Q6ZN54 512 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 RINLQ6ZS11 566 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 CCDC103Q8IW40 242 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 C3orf56Q8N813 242 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 ZHX1-C8orf76Q96EF9 292 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 ARL5BQ96KC2 179 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 LAT2Q9GZY6 243 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 SLC7A10Q9NS82 523 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 CA10Q9NS85 328 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 GPATCH2Q9NW75 528 aa11.88□□□□□ -0.51
CTDSP1-210ENST00000491064 SERINC4A6NH21 518 aa11.87□□□□□ -0.51
CTDSP1-210ENST00000491064 H3BQF6 201 aa11.87□□□□□ -0.51
CTDSP1-210ENST00000491064 DNPH1O43598 174 aa11.87□□□□□ -0.51
CTDSP1-210ENST00000491064 ZNF500O60304 480 aaPredicted RBP11.87□□□□□ -0.51
CTDSP1-210ENST00000491064 CYP7B1O75881 506 aa11.87□□□□□ -0.51
CTDSP1-210ENST00000491064 PDE5AO76074 875 aa11.87□□□□□ -0.51
CTDSP1-210ENST00000491064 PMS2P2O95744 297 aa11.87□□□□□ -0.51
CTDSP1-210ENST00000491064 WNT11O96014 354 aa11.87□□□□□ -0.51
CTDSP1-210ENST00000491064 GSTA1P08263 222 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms