RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 TRIM77I1YAP6 450 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 IMPA2O14732 288 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 DDNO94850 711 aaPredicted RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 GJA1P17302 382 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 PBX2P40425 430 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 SLC6A12P48065 614 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 PXNP49023 591 aaPredicted RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 MVDP53602 400 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 LTBQ06643 244 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 RIN1Q13671 783 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 RAB33AQ14088 237 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 SLC25A35Q3KQZ1 300 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 C14orf28Q4W4Y0 310 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 VASNQ6EMK4 673 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 TMEM150AQ86TG1 271 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 AMZ2Q86W34 360 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 SLC35F2Q8IXU6 374 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 FAM181AQ8N9Y4 354 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 KLHDC9Q8NEP7 349 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 SIGLEC11Q96RL6 698 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 HINT3Q9NQE9 182 aaKnown RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 MBLAC1A4D2B0 266 aaPredicted RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 LRRC72A6NJI9 287 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 TNFRSF10BO14763 440 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 PRICKLE3O43900 615 aaPredicted RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 IFNA21P01568 189 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 HPXP02790 462 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 NMBP08949 121 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 GABRA1P14867 456 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 SNRPEP62304 92 aaKnown RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 PRKCZQ05513 592 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 RBM39Q14498 530 aaKnown RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 RNLSQ5VYX0 342 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 B3GNTL1Q67FW5 361 aaPredicted RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 FBXO42Q6P3S6 717 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 RPL22L1Q6P5R6 122 aaKnown RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 RNF180Q86T96 592 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 VRK3Q8IV63 474 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 SNIP1Q8TAD8 396 aaKnown RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 SULT4A1Q9BR01 284 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 ZNF251Q9BRH9 671 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 ZNF700Q9H0M5 742 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 SLC35A3Q9Y2D2 325 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 ZNF736B4DX44 427 aaPredicted RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 PSMD9O00233 223 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 FOXE1O00358 373 aaPredicted RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 LANCL1O43813 399 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 ZNF623O75123 536 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 PTP4A3O75365 173 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 OR2F2O95006 317 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 VNN2O95498 520 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 FOSL2P15408 326 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 RGS19P49795 217 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 PPT1P50897 306 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 SIRPAP78324 504 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 IL13RA1P78552 427 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 ILF3Q12906 894 aaKnown RBP eCLIP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 OR2F1Q13607 317 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 RAB11BQ15907 218 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 FAM71E1Q6IPT2 247 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 ADAM5Q6NVV9 412 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 ZNF280BQ86YH2 543 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 OR5M1Q8NGP8 315 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 OR5AK2Q8NH90 309 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 SFT2D1Q8WV19 159 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 ZNF689Q96CS4 500 aaPredicted RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 TOE1Q96GM8 510 aaKnown RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 RNF32Q9H0A6 362 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 LINC00597Q9H2U6 94 aa10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 LSM2Q9Y333 95 aaKnown RBP10.53□□□□□ -0.72
CRNKL1-204ENST00000490910 RPS10-NUDT3A0A1W2PQS6 291 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 MPC2O95563 127 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 EOMESO95936 686 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 RENP00797 406 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 SFTPBP07988 381 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 FBXO45P0C2W1 286 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 CD53P19397 219 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 FPR3P25089 353 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 RPS10P46783 165 aaKnown RBP10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 CSNK1DP48730 415 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 TAS2R19P59542 299 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 AKR1C8PQ5T2L2 129 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 C1orf94Q6P1W5 598 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 VRK2Q86Y07 508 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 CACUL1Q86Y37 369 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 CMTM4Q8IZR5 234 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 ZNF687Q8N1G0 1237 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 TMEM99Q8N816 258 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 ZNF565Q8N9K5 539 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 OR2L3Q8NG85 312 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 TMEM239Q8WW34 195 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 YIPF5Q969M3 257 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 UBQLN3Q9H347 655 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 ELL3Q9HB65 397 aaPredicted RBP10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 NOX4Q9NPH5 578 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 ACSS1Q9NUB1 689 aaPredicted RBP10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 PPP4R1LQ9P1A2 415 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 LHX3Q9UBR4 397 aa10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 PURGQ9UJV8 347 aaKnown RBP10.52□□□□□ -0.72
CRNKL1-204ENST00000490910 A0A0B4J2A0 478 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms