RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 RSPO3Q9BXY4 272 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-207ENST00000490696 SRXN1Q9BYN0 137 aa13.78□□□□□ -0.2
VPS26A-207ENST00000490696 PIGMQ9H3S5 423 aa13.78□□□□□ -0.2
VPS26A-207ENST00000490696 PACSIN3Q9UKS6 424 aa13.78□□□□□ -0.2
VPS26A-207ENST00000490696 MCTS1Q9ULC4 181 aaKnown RBP13.78□□□□□ -0.2
VPS26A-207ENST00000490696 IFT52Q9Y366 437 aa13.78□□□□□ -0.2
VPS26A-207ENST00000490696 FBN2P35556 2912 aa13.77□□□□□ -0.2
VPS26A-207ENST00000490696 CFAP73A6NFT4 308 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 FXYD1O00168 92 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 DYNC1I1O14576 645 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 SYNGR4O95473 234 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 PABPC4LP0CB38 370 aaKnown RBP13.77□□□□□ -0.21
VPS26A-207ENST00000490696 GKN3PP0CG01 181 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 APOBEC1P41238 236 aaKnown RBP13.77□□□□□ -0.21
VPS26A-207ENST00000490696 ACAA2P42765 397 aaKnown RBP13.77□□□□□ -0.21
VPS26A-207ENST00000490696 SEC24CP53992 1094 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 MTPNP58546 118 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 CAPRIN1Q14444 709 aaKnown RBP13.77□□□□□ -0.21
VPS26A-207ENST00000490696 ZNF239Q16600 458 aaKnown RBP13.77□□□□□ -0.21
VPS26A-207ENST00000490696 ZSWIM7Q19AV6 140 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 TRMT5Q32P41 509 aaKnown RBP13.77□□□□□ -0.21
VPS26A-207ENST00000490696 REEP3Q6NUK4 255 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 VWA1Q6PCB0 445 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 ADGRG3Q86Y34 549 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 PTOV1Q86YD1 416 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 CPNE4Q96A23 557 aaPredicted RBP13.77□□□□□ -0.21
VPS26A-207ENST00000490696 KAT8Q9H7Z6 458 aaKnown RBP13.77□□□□□ -0.21
VPS26A-207ENST00000490696 CTPS2Q9NRF8 586 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 SERINC1Q9NRX5 453 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 FOXD3Q9UJU5 478 aaPredicted RBP13.77□□□□□ -0.21
VPS26A-207ENST00000490696 ZNF232Q9UNY5 417 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 CAPN7Q9Y6W3 813 aa13.77□□□□□ -0.21
VPS26A-207ENST00000490696 APCP25054 2843 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 A0A1W2PNR3 127 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 BBIP1A8MTZ0 92 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 SLC22A2O15244 555 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 SLC6A2P23975 617 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 SLC7A1P30825 629 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 UQCRC1P31930 480 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 SLC1A3P43003 542 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 SCARB2Q14108 478 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 MAPRE2Q15555 327 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 SYT14P1Q58G82 188 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 ZNF311Q5JNZ3 666 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 REP15Q6BDI9 236 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 PPP4R4Q6NUP7 873 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 NET1Q7Z628 596 aaPredicted RBP13.76□□□□□ -0.21
VPS26A-207ENST00000490696 BTLAQ7Z6A9 289 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 SNX32Q86XE0 403 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 CNEP1R1Q8N9A8 125 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 SLC25A43Q8WUT9 341 aaPredicted RBP13.76□□□□□ -0.21
VPS26A-207ENST00000490696 ROBO4Q8WZ75 1007 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 LRRC46Q96FV0 321 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 SLC39A3Q9BRY0 314 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 PRRG4Q9BZD6 226 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 CACYBPQ9HB71 228 aaKnown RBP13.76□□□□□ -0.21
VPS26A-207ENST00000490696 TIGARQ9NQ88 270 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 ARMCX1Q9P291 453 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 CHRNA9Q9UGM1 479 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 OSGIN1Q9UJX0 560 aa13.76□□□□□ -0.21
VPS26A-207ENST00000490696 LOC100653049A0A140TA62 436 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 A8MXE2 369 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 MSTNO14793 375 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 KRT34O76011 436 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 CGAP01215 116 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 PRG2P13727 222 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 UQCRBP14927 111 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 PRKAR1BP31321 381 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 LSP1P33241 339 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 HTR3AP46098 478 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 GYS2P54840 703 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 RAC3P60763 192 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 SIRPAP78324 504 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 RBBP4Q09028 425 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 SNTB1Q13884 538 aaKnown RBP13.75□□□□□ -0.21
VPS26A-207ENST00000490696 CYLC2Q14093 348 aaPredicted RBP13.75□□□□□ -0.21
VPS26A-207ENST00000490696 NANOGP8Q6NSW7 305 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 FAM214BQ7L5A3 538 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 ZNF550Q7Z398 422 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 GDF7Q7Z4P5 450 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 SPATA21Q7Z572 469 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 LUZP2Q86TE4 346 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 SERPINA11Q86U17 422 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 C11orf65Q8NCR3 313 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 HIPK4Q8NE63 616 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 RNF128Q8TEB7 428 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 SLC35B4Q969S0 331 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 LRRC58Q96CX6 371 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 C14orf79Q96F83 325 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 MS4A3Q96HJ5 214 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 GMPPAQ96IJ6 420 aaPredicted RBP13.75□□□□□ -0.21
VPS26A-207ENST00000490696 OR5B2Q96R09 309 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 ELAC2Q9BQ52 826 aaKnown RBP13.75□□□□□ -0.21
VPS26A-207ENST00000490696 RBM24Q9BX46 236 aaKnown RBP13.75□□□□□ -0.21
VPS26A-207ENST00000490696 ADAM19Q9H013 955 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 ARMC7Q9H6L4 198 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 NANOGQ9H9S0 305 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 GLRX2Q9NS18 164 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 PRDM4Q9UKN5 801 aa13.75□□□□□ -0.21
VPS26A-207ENST00000490696 CLEC4AQ9UMR7 237 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms