RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 AGTR1P30556 359 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 CD79BP40259 229 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 MAGEA8P43361 318 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 DAZAP2Q15038 168 aaPredicted RBP16.17■□□□□ 0.18
COL9A3-214ENST00000490398 EXOC3L2Q2M3D2 409 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 PDSS1Q5T2R2 415 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 NUFIP2Q7Z417 695 aaKnown RBP16.17■□□□□ 0.18
COL9A3-214ENST00000490398 C12orf49Q9H741 205 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 SLC24A3Q9HC58 644 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 RASSF1Q9NS23 344 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 FGFR1OP2Q9NVK5 253 aa16.17■□□□□ 0.18
COL9A3-214ENST00000490398 ZNF443Q9Y2A4 671 aaPredicted RBP16.17■□□□□ 0.18
COL9A3-214ENST00000490398 A0A1W2PPR1 153 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 CDHR4A6H8M9 788 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 SMAD9O15198 467 aaKnown RBP16.16■□□□□ 0.18
COL9A3-214ENST00000490398 PLGP00747 810 aaPredicted RBP16.16■□□□□ 0.18
COL9A3-214ENST00000490398 EDNRAP25101 427 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 SLC7A1P30825 629 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 ACAA2P42765 397 aaKnown RBP16.16■□□□□ 0.18
COL9A3-214ENST00000490398 CRISP3P54108 245 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 GUCY1A3Q02108 690 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 EPS8Q12929 822 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 SELPLGQ14242 412 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 POU4F3Q15319 338 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 ANKRD34AQ69YU3 496 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 C3orf33Q6P1S2 294 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 FCRLAQ7L513 359 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 ZNF550Q7Z398 422 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 GRINAQ7Z429 371 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 CDH24Q86UP0 819 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 TUSC5Q8IXB3 177 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 OR6K3Q8NGY3 331 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 TMEM234Q8WY98 164 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 CPNE4Q96A23 557 aaPredicted RBP16.16■□□□□ 0.18
COL9A3-214ENST00000490398 ZNF775Q96BV0 537 aaPredicted RBP16.16■□□□□ 0.18
COL9A3-214ENST00000490398 ARL5BQ96KC2 179 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 WFIKKN1Q96NZ8 548 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 A4GALTQ9NPC4 353 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 PLSCR4Q9NRQ2 329 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 ITGB1BP2Q9UKP3 347 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 EMC9Q9Y3B6 208 aa16.16■□□□□ 0.18
COL9A3-214ENST00000490398 UQCRHLA0A096LP55 91 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 A0A0G2JPF8 293 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 SH3D21A4FU49 640 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 GJE1A6NN92 205 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 HNRNPCL2B2RXH8 293 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 HNRNPCL3B7ZW38 293 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 SIAH2O43255 324 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 FRS3O43559 492 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 HNRNPCL1O60812 293 aaKnown RBP16.15■□□□□ 0.18
COL9A3-214ENST00000490398 HNRNPCL4P0DMR1 293 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 PEX19P40855 299 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 APOBEC1P41238 236 aaKnown RBP16.15■□□□□ 0.18
COL9A3-214ENST00000490398 CTBP2P56545 445 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 RAC3P60763 192 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 SYT14P1Q58G82 188 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 COMTD1Q86VU5 262 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 CMIPQ8IY22 773 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 PEX5LQ8IYB4 626 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 NFKBIDQ8NI38 313 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 PMM1Q92871 262 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 CPPED1Q9BRF8 314 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-214ENST00000490398 POLDIP3Q9BY77 421 aaKnown RBP16.15■□□□□ 0.18
COL9A3-214ENST00000490398 TMEM45AQ9NWC5 275 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 KLHL28Q9NXS3 571 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 OSGIN1Q9UJX0 560 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 TESMINQ9Y4I5 508 aa16.15■□□□□ 0.18
COL9A3-214ENST00000490398 ANKRD17O75179 2603 aaKnown RBP16.14■□□□□ 0.17
COL9A3-214ENST00000490398 TMED7-TICAM2A0A0A6YYA0 188 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 TMEM72A0PK05 275 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 ZC3H12DA2A288 527 aaKnown RBP16.14■□□□□ 0.17
COL9A3-214ENST00000490398 CFAP73A6NFT4 308 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 ZNF814B7Z6K7 855 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 PGM3O95394 542 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 FESP07332 822 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 ARAFP10398 606 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 TFPIP10646 304 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 POU2F1P14859 743 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 TACR3P29371 465 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 UGT2B10P36537 528 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 KCNJ5P48544 419 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 DIO1P49895 249 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 HOXC5Q00444 222 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 FADDQ13158 208 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 ADRM1Q16186 407 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 LIN52Q52LA3 116 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 RUNDC3AQ59EK9 446 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 TMPPEQ6ZT21 453 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.14■□□□□ 0.17
COL9A3-214ENST00000490398 CDC20BQ86Y33 519 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 DACH2Q96NX9 599 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 ZNF300Q96RE9 604 aaPredicted RBP16.14■□□□□ 0.17
COL9A3-214ENST00000490398 PSD2Q9BQI7 771 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 CLEC4MQ9H2X3 399 aaPredicted RBP16.14■□□□□ 0.17
COL9A3-214ENST00000490398 BCL2L10Q9HD36 194 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 TIGARQ9NQ88 270 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 SERINC1Q9NRX5 453 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 CALML5Q9NZT1 146 aa16.14■□□□□ 0.17
COL9A3-214ENST00000490398 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.14■□□□□ 0.17
COL9A3-214ENST00000490398 CHRNA9Q9UGM1 479 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms