RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 YIPF5Q969M3 257 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 APH1AQ96BI3 265 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 TM4SF18Q96CE8 201 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 KATNB1Q9BVA0 655 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 MRPL1Q9BYD6 325 aaKnown RBP6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 TPK1Q9H3S4 243 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF442Q9H7R0 627 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF665Q9H7R5 613 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 BEX1Q9HBH7 125 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 DCTN4Q9UJW0 460 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 ADAM29Q9UKF5 820 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 CLPSL1A2RUU4 121 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 ZNF195O14628 629 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 PSPNO60542 156 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 NCR1O76036 304 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 OXSR1O95747 527 aaPredicted RBP6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 NGFP01138 241 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 TPM3P06753 285 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 NGFRP08138 427 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 ADRA2AP08913 450 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 TPM1P09493 284 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 LTA4HP09960 611 aaKnown RBP6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 ANPEPP15144 967 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 CD1DP15813 335 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 NPR2P20594 1047 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 GATA3P23771 443 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 CALCRP30988 508 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 THBS4P35443 961 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 EIF1P41567 113 aaKnown RBP6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 PRIM2P49643 509 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 MAPK12P53778 367 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 RAG2P55895 527 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 TMEM33P57088 247 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 TPM4P67936 248 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 NAAAQ02083 359 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 HLXQ14774 488 aaPredicted RBP6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 TRADDQ15628 312 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 SLC9B1Q4ZJI4 515 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 SPANXN3Q5MJ09 141 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 ZNF362Q5T0B9 420 aaPredicted RBP6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 CCNYL2Q5T2Q4 361 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 C9orf135Q5VTT2 229 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 LIPJQ5W064 366 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 MYLK4Q86YV6 388 aaPredicted RBP6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 SYCE1Q8N0S2 351 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 METTL4Q8N3J2 472 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 NAT8LQ8N9F0 302 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 GATSQ8NAP1 163 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 DEFB108BQ8NET1 73 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 OR4F5Q8NH21 305 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 OR4C3Q8NH37 302 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 FBXO30Q8TB52 745 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 ZNF524Q96C55 264 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 SH3YL1Q96HL8 342 aaPredicted RBP6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 BOD1Q96IK1 185 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 SLC38A2Q96QD8 506 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 SERPINI1Q99574 410 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 GPA33Q99795 319 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 MCMBPQ9BTE3 642 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 GATA5Q9BWX5 397 aaPredicted RBP6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 SEC61A2Q9H9S3 476 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 POPDC3Q9HBV1 291 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 ZNF275Q9NSD4 429 aaPredicted RBP6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 PLEK2Q9NYT0 353 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 TAS2R9Q9NYW1 312 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 CD274Q9NZQ7 290 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 OPTCQ9UBM4 332 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 NUP50Q9UKX7 468 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 PSME2Q9UL46 239 aa6.08□□□□□ -1.44
PDLIM1-203ENST00000490391 GXYLT2A0PJZ3 443 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 SH3PXD2BA1X283 911 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 C5orf63A6NC05 138 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 GJE1A6NN92 205 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 CXorf49A8MYA2 514 aaPredicted RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 KIF2AO00139 706 aaPredicted RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 PPIHO43447 177 aaKnown RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 CLPXO76031 633 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 NDUFA7O95182 113 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 H6PDO95479 791 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 IGHV2-5P01817 119 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 CRYAAP02489 173 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 CECR9P0C854 216 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 RFX3P48380 749 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 PIK3CGP48736 1102 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 PRPS1P60891 318 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 PHEXP78562 749 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 GALNT1Q10472 559 aaPredicted RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 PDK3Q15120 406 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 CD226Q15762 336 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 HIKESHIQ53FT3 197 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 HP1BP3Q5SSJ5 553 aaPredicted RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 ANKRD16Q6P6B7 361 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 PAGE2Q7Z2X7 111 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 COMMD6Q7Z4G1 85 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 SPATA21Q7Z572 469 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 OR4F15Q8NGB8 312 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 FBXO27Q8NI29 283 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 CKAP2Q8WWK9 683 aa6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 GTF3AQ92664 365 aaKnown RBP6.07□□□□□ -1.44
PDLIM1-203ENST00000490391 RDH5Q92781 318 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms