RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 ZNF239Q16600 458 aaKnown RBP17.1■□□□□ 0.33
EPHB4-207ENST00000489808 ZSWIM7Q19AV6 140 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 LIN52Q52LA3 116 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 RUNDC3AQ59EK9 446 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 C3orf33Q6P1S2 294 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 GRINAQ7Z429 371 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 ADGRG3Q86Y34 549 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 ZNF440Q8IYI8 595 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 C10orf111Q8N326 155 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 CLIP4Q8N3C7 705 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 DPP10Q8N608 796 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 ZNF610Q8N9Z0 462 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 LINC01560Q8TB33 94 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 REXO5Q96IC2 774 aaKnown RBP17.1■□□□□ 0.33
EPHB4-207ENST00000489808 OPN3Q9H1Y3 402 aaPredicted RBP17.1■□□□□ 0.33
EPHB4-207ENST00000489808 IKZF5Q9H5V7 419 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 CTPS2Q9NRF8 586 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 PLSCR4Q9NRQ2 329 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.1■□□□□ 0.33
EPHB4-207ENST00000489808 PRDM4Q9UKN5 801 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 IFT52Q9Y366 437 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 EMC9Q9Y3B6 208 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 APCP25054 2843 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 DCHS2Q6V1P9 2916 aa17.1■□□□□ 0.33
EPHB4-207ENST00000489808 MED12LQ86YW9 2145 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 A0A1W2PNR3 127 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 EVPLLA8MZ36 301 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 ANGPT2O15123 496 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 PGM3O95394 542 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 THBS1P07996 1170 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 FKBP2P26885 142 aaKnown RBP17.09■□□□□ 0.33
EPHB4-207ENST00000489808 PCYT1AP49585 367 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 CTBP2P56545 445 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 FAM27E3Q08E93 113 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 EPS8Q12929 822 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 GCNT6Q5T4J0 391 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 ZNF836Q6ZNA1 936 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 TMPPEQ6ZT21 453 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 RETREG3Q86VR2 466 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 ZZZ3Q8IYH5 903 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 OR6K3Q8NGY3 331 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 BBS10Q8TAM1 723 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 OR5B2Q96R09 309 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 SPATA9Q9BWV2 254 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 CHRNA9Q9UGM1 479 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 PROCRQ9UNN8 238 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 CORO2BQ9UQ03 480 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 ZNF443Q9Y2A4 671 aaPredicted RBP17.09■□□□□ 0.33
EPHB4-207ENST00000489808 CHST2Q9Y4C5 530 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 ABCA12Q86UK0 2595 aa17.09■□□□□ 0.33
EPHB4-207ENST00000489808 C5orf58C9J3I9 102 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 ARAFP10398 606 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 EPXP11678 715 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 ENPP1P22413 925 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 ACAA2P42765 397 aaKnown RBP17.08■□□□□ 0.32
EPHB4-207ENST00000489808 SLC1A3P43003 542 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 HTR3AP46098 478 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 CDK6Q00534 326 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 DAZAP2Q15038 168 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-207ENST00000489808 RNF220Q5VTB9 566 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 FCRLAQ7L513 359 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 RNF128Q8TEB7 428 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 SLC25A43Q8WUT9 341 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-207ENST00000489808 CPPED1Q9BRF8 314 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-207ENST00000489808 SLC39A3Q9BRY0 314 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 ADAM19Q9H013 955 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 ARMC7Q9H6L4 198 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 CACYBPQ9HB71 228 aaKnown RBP17.08■□□□□ 0.32
EPHB4-207ENST00000489808 ELOVL5Q9NYP7 299 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 SPIN1Q9Y657 262 aaPredicted RBP17.08■□□□□ 0.32
EPHB4-207ENST00000489808 HEATR5AQ86XA9 2040 aa17.08■□□□□ 0.32
EPHB4-207ENST00000489808 FAM221AA4D161 298 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 PRKD3O94806 890 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 GKN3PP0CG01 181 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 TFPIP10646 304 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 UQCRBP14927 111 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 ETS2P15036 469 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 CD79BP40259 229 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 CLK1P49759 484 aaKnown RBP17.07■□□□□ 0.32
EPHB4-207ENST00000489808 POLR2HP52434 150 aaKnown RBP17.07■□□□□ 0.32
EPHB4-207ENST00000489808 RNPS1Q15287 305 aaKnown RBP17.07■□□□□ 0.32
EPHB4-207ENST00000489808 ADRM1Q16186 407 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 SYT14P1Q58G82 188 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 ZNF311Q5JNZ3 666 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 ZNF550Q7Z398 422 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 DHDDSQ86SQ9 333 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 SLC43A2Q8N370 569 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 NFKBIDQ8NI38 313 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 ABHD3Q8WU67 409 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 ANKRD27Q96NW4 1050 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 ZNF317Q96PQ6 595 aaPredicted RBP17.07■□□□□ 0.32
EPHB4-207ENST00000489808 CGREF1Q99674 301 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 TMEM38AQ9H6F2 299 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 SAR1AQ9NR31 198 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 MRGBPQ9NV56 204 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 OSGIN1Q9UJX0 560 aa17.07■□□□□ 0.32
EPHB4-207ENST00000489808 CSMD1Q96PZ7 3565 aa17.06■□□□□ 0.32
EPHB4-207ENST00000489808 TMED7-TICAM2A0A0A6YYA0 188 aa17.06■□□□□ 0.32
EPHB4-207ENST00000489808 CTAG2O75638 210 aa17.06■□□□□ 0.32
EPHB4-207ENST00000489808 CCNA2P20248 432 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms