RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 ACAA2P42765 397 aaKnown RBP9.96□□□□□ -0.82
CPSF7-212ENST00000489728 IDH2P48735 452 aaKnown RBP9.96□□□□□ -0.82
CPSF7-212ENST00000489728 SUCLG1P53597 346 aaKnown RBP9.96□□□□□ -0.82
CPSF7-212ENST00000489728 MERTKQ12866 999 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 SPATS1Q496A3 300 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 HBMQ6B0K9 141 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 WBP2NLQ6ICG8 309 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 HMGN2P46Q86SG4 172 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 SLC15A3Q8IY34 581 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 CLIP4Q8N3C7 705 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 LSMEM1Q8N8F7 131 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 TNIP2Q8NFZ5 429 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 OR2T12Q8NG77 320 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 OR10D3Q8NH80 312 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 SMPDL3BQ92485 455 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 CPNE4Q96A23 557 aaPredicted RBP9.96□□□□□ -0.82
CPSF7-212ENST00000489728 SDCCAG3Q96C92 435 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 NPAS1Q99742 590 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 SFXN3Q9BWM7 321 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 ADAM19Q9H013 955 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 C12orf10Q9HB07 376 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 GP6Q9HCN6 339 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 CHST11Q9NPF2 352 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 GLRX2Q9NS18 164 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 RLIMQ9NVW2 624 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 ABCD2Q9UBJ2 740 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 Q9UFV3 132 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 TAGLN3Q9UI15 199 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 SLC13A4Q9UKG4 626 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 MCTS1Q9ULC4 181 aaKnown RBP9.96□□□□□ -0.82
CPSF7-212ENST00000489728 HDGFL3Q9Y3E1 203 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 PTPN13Q12923 2485 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 SPTAN1Q13813 2472 aaKnown RBP9.95□□□□□ -0.82
CPSF7-212ENST00000489728 ELOVL7A1L3X0 281 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 AP3D1O14617 1153 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 DVL2O14641 736 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 EFNA2O43921 213 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 GCM2O75603 506 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-212ENST00000489728 TOXO94900 526 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 SYNGR4O95473 234 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 TMIGD3P0DMS9 266 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-212ENST00000489728 IL11P20809 199 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 CTSSP25774 331 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 AQP1P29972 269 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 EIF1AXP47813 144 aaKnown RBP9.95□□□□□ -0.82
CPSF7-212ENST00000489728 KCNJ5P48544 419 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 SLC7A2P52569 658 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 CARD18P57730 90 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 RAC3P60763 192 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 NCALDP61601 193 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 CSNK2A1P68400 391 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-212ENST00000489728 SGCBQ16585 318 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 SYT14P1Q58G82 188 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 SWT1Q5T5J6 900 aaKnown RBP9.95□□□□□ -0.82
CPSF7-212ENST00000489728 GTF2IRD2BQ6EKJ0 949 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 C6orf89Q6UWU4 347 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 P4HA3Q7Z4N8 544 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 GTF2IRD2Q86UP8 949 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 RANBP3LQ86VV4 465 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-212ENST00000489728 MICU2Q8IYU8 434 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 C9orf106Q8NAJ2 232 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 OR10Q1Q8NGQ4 319 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 ZNF524Q96C55 264 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 DDIT4LQ96D03 193 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 ZNF559Q9BR84 538 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 TACO1Q9BSH4 297 aaKnown RBP9.95□□□□□ -0.82
CPSF7-212ENST00000489728 TRIM2Q9C040 744 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 PIGMQ9H3S5 423 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 ALG2Q9H553 416 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 RNF122Q9H9V4 155 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 CMTM6Q9NX76 183 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 BAG5Q9UL15 447 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 MED12Q93074 2177 aa9.95□□□□□ -0.82
CPSF7-212ENST00000489728 ASH1LQ9NR48 2969 aaKnown RBP9.95□□□□□ -0.82
CPSF7-212ENST00000489728 SPTBN1Q01082 2364 aaKnown RBP9.94□□□□□ -0.82
CPSF7-212ENST00000489728 TMED7-TICAM2A0A0A6YYA0 188 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 A0A0J9YW62 118 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 M0QX08 132 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 NME4O00746 187 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 TNFSF11O14788 317 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 PMS2P2O95744 297 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 CLDN1O95832 211 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 LGI1O95970 557 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 PNMTP11086 282 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 TACR3P29371 465 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 SFTPDP35247 375 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 PEX19P40855 299 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 PCYT1AP49585 367 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 ZNF136P52737 540 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 RGS8P57771 180 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-212ENST00000489728 PSME3P61289 254 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 LIPEQ05469 1076 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 DMTNQ08495 405 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 PON3Q15166 354 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 RNPS1Q15287 305 aaKnown RBP9.94□□□□□ -0.82
CPSF7-212ENST00000489728 ZNF239Q16600 458 aaKnown RBP9.94□□□□□ -0.82
CPSF7-212ENST00000489728 NRF1Q16656 503 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 TMEM176BQ3YBM2 270 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-212ENST00000489728 FBXL19-AS1Q494R0 122 aa9.94□□□□□ -0.82
CPSF7-212ENST00000489728 C5orf46Q6UWT4 87 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms