RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 LSM11P83369 360 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPS26A-205ENST00000489656 ALDH6A1Q02252 535 aaKnown RBP12.88□□□□□ -0.35
VPS26A-205ENST00000489656 NPRL3Q12980 569 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 IL18R1Q13478 541 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 KEAP1Q14145 624 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 QPRTQ15274 297 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 ZIK1Q3SY52 487 aaPredicted RBP12.88□□□□□ -0.35
VPS26A-205ENST00000489656 SLC25A53Q5H9E4 307 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 TTC33Q6PID6 262 aaPredicted RBP12.88□□□□□ -0.35
VPS26A-205ENST00000489656 PRICKLE2Q7Z3G6 844 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 GRINAQ7Z429 371 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 GALNT5Q7Z7M9 940 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 WDSUB1Q8N9V3 476 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 ZNF555Q8NEP9 628 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 OR2M3Q8NG83 312 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 CYGBQ8WWM9 190 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 GTPBP3Q969Y2 492 aaKnown RBP12.88□□□□□ -0.35
VPS26A-205ENST00000489656 ZNF524Q96C55 264 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 PITX2Q99697 317 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 KLHDC3Q9BQ90 382 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 RNF32Q9H0A6 362 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 SACM1LQ9NTJ5 587 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 REV1Q9UBZ9 1251 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 LOC100130705A0A1B0GUX0 176 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 ELOA3DA6NLF2 546 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-205ENST00000489656 PIP5K1CO60331 668 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 NTN1O95631 604 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 NUDT14O95848 222 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 TP53P04637 393 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-205ENST00000489656 PRKAR1AP10644 381 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 OSMP13725 252 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 POLR2HP52434 150 aaKnown RBP12.87□□□□□ -0.35
VPS26A-205ENST00000489656 FOXD4Q12950 439 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-205ENST00000489656 TUBA3CQ13748 450 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 TOMM34Q15785 309 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-205ENST00000489656 ELOA3BQ3SY89 546 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 PRAMEF20Q5VT98 475 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 AGAP7PQ5VUJ5 663 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 TUBA3EQ6PEY2 450 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 ISLR2Q6UXK2 745 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 RASSF6Q6ZTQ3 369 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 TMPRSS11FQ6ZWK6 438 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 PLCZ1Q86YW0 608 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 PSD4Q8NDX1 1056 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 ELOA3Q8NG57 546 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 FAM46AQ96IP4 442 aaKnown RBP12.87□□□□□ -0.35
VPS26A-205ENST00000489656 HRASLS5Q96KN8 279 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 ZNF570Q96NI8 536 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 AGAP4Q96P64 663 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 GPA33Q99795 319 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 UTP23Q9BRU9 249 aaKnown RBP12.87□□□□□ -0.35
VPS26A-205ENST00000489656 ING2Q9H160 280 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 RIBC2Q9H4K1 309 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 MEPEQ9NQ76 525 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-205ENST00000489656 MED11Q9P086 117 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 HRH3Q9Y5N1 445 aa12.87□□□□□ -0.35
VPS26A-205ENST00000489656 IGKV1D-42A0A075B6H8 117 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 A0A087WZY1 265 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 KLK10O43240 276 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 EFSO43281 561 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 TRIM3O75382 744 aaPredicted RBP12.86□□□□□ -0.35
VPS26A-205ENST00000489656 P04436 131 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 POU2F1P14859 743 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 PRKCAP17252 672 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 TACR3P29371 465 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 CD96P40200 585 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 CRISP1P54107 249 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 IL1RL1Q01638 556 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 MFAP5Q13361 173 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 MDGA2Q7Z553 956 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 CDK20Q8IZL9 346 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 CLDN22Q8N7P3 220 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 PFN4Q8NHR9 129 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 RNF217Q8TC41 542 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 MRGPRX4Q96LA9 322 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 NR1H4Q96RI1 486 aaPredicted RBP12.86□□□□□ -0.35
VPS26A-205ENST00000489656 DSN1Q9H410 356 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 PTGES2Q9H7Z7 377 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 TIMMDC1Q9NPL8 285 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 GPR83Q9NYM4 423 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 LRFN1Q9P244 771 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 OSGIN1Q9UJX0 560 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 NDRG4Q9ULP0 352 aaKnown RBP12.86□□□□□ -0.35
VPS26A-205ENST00000489656 HSPE1-MOB4S4R3N1 261 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 ACACAQ13085 2346 aa12.86□□□□□ -0.35
VPS26A-205ENST00000489656 APC2O95996 2303 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 BCKDKO14874 412 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 CEACAM4O75871 244 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 NEURL1O76050 574 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 WDPCPO95876 746 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 GNAO1P09471 354 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 IFI30P13284 250 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 CXCR1P25024 350 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 ADH6P28332 368 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 EPHA2P29317 976 aa12.85□□□□□ -0.35
VPS26A-205ENST00000489656 POLR2IP36954 125 aaKnown RBP12.85□□□□□ -0.35
VPS26A-205ENST00000489656 APOBEC1P41238 236 aaKnown RBP12.85□□□□□ -0.35
VPS26A-205ENST00000489656 ST13P50502 369 aaKnown RBP12.85□□□□□ -0.35
VPS26A-205ENST00000489656 ZNF41P51814 821 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms